Genome ID:GCA_004119555.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 10 | 4 | 16.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DFFGOJJN_1 | 2524269 | 2525123 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| DFFGOJJN_1 | 2507170 | 2508372 | blt | ARO:3003006 | blt | 99.25 | 100.00 | L32599.1 |
| DFFGOJJN_1 | 2328529 | 2329698 | bmr | ARO:3003007 | bmr | 99.49 | 100.00 | M33768.1 |
| DFFGOJJN_1 | 1384966 | 1385283 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| DFFGOJJN_1 | 1384628 | 1384966 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| DFFGOJJN_1 | 886289 | 888859 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.65 | 100.00 | AL009126.3 |
| DFFGOJJN_1 | 587575 | 589221 | vmlR | ARO:3004476 | vmlR | 98.91 | 100.18 | NC_000964.3 |
| DFFGOJJN_1 | 334816 | 335409 | tmrB | ARO:3003059 | tmrB | 98.48 | 100.00 | AL009126.3 |
| DFFGOJJN_1 | 284292 | 285725 | lmrB | ARO:3002813 | lmrB | 99.16 | 100.00 | JYFL01000006.1 |
| DFFGOJJN_1 | 271490 | 272410 | mphK | ARO:3004541 | mphK | 98.69 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DFFGOJJN_1 | 271490 | 272410 | mph(K) | Spiramycin, Telithromycin | 99.24 | 100.00 | NC_000964 |
| DFFGOJJN_1 | 2524269 | 2525123 | aadK | Streptomycin | 98.83 | 100.00 | M26879 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DFFGOJJN_1 | 587578 | 589221 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.91 | 100.00 | WP_003234144.1 |
| DFFGOJJN_1 | 271490 | 272407 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.69 | 100.00 | WP_003246254.1 |
| DFFGOJJN_1 | 2524272 | 2525123 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| DFFGOJJN_1 | 4083355 | 4083873 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 91.91 | 100.00 | WP_003242546.1 |
| DFFGOJJN_1 | 2014142 | 2016730 | rphC | rifamycin-inactivating phosphotransferase RphC | INTERNAL_STOP | 80.25 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| DFFGOJJN_1 | 3126837 | 3133973 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.71 | 100.00 | NP_391076 |
| DFFGOJJN_1 | 3593328 | 3593777 | capC | 0.0 | Capsule | Immune modulation | 99.56 | 100.00 | NP_391470 |
| DFFGOJJN_1 | 3593792 | 3594973 | capB | 0.0 | Capsule | Immune modulation | 99.49 | 100.00 | NP_391471 |
| DFFGOJJN_1 | 3137829 | 3138614 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| DFFGOJJN_1 | 3592167 | 3593309 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| DFFGOJJN_1 | 3136607 | 3137803 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.00 | 100.00 | NP_391079 |
| DFFGOJJN_1 | 1963558 | 1965321 | dep/capD | 0.0 | Capsule | Immune modulation | 98.92 | 100.00 | NP_389723 |
| DFFGOJJN_1 | 2127915 | 2128556 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 98.91 | 100.00 | NP_390062 |
| DFFGOJJN_1 | 3133993 | 3134931 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.30 | 100.00 | NP_391077 |
| DFFGOJJN_1 | 3134959 | 3136578 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.41 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DFFGOJJN_1 | 132496 | 133632 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| DFFGOJJN_1 | 18600 | 19469 | pdxS | 3.05e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| DFFGOJJN_1 | 1700481 | 1701257 | CodY | 3.33e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| DFFGOJJN_1 | 3438821 | 3439390 | ClpP | 2.47e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |