Genome ID:GCA_004119675.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 4 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KPHONNAB_1 | 2507443 | 2508297 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| KPHONNAB_1 | 2490344 | 2491546 | blt | ARO:3003006 | blt | 99.25 | 100.00 | L32599.1 |
| KPHONNAB_1 | 2263578 | 2264747 | bmr | ARO:3003007 | bmr | 99.49 | 100.00 | M33768.1 |
| KPHONNAB_1 | 1370297 | 1370614 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| KPHONNAB_1 | 1369959 | 1370297 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| KPHONNAB_1 | 890111 | 892681 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.88 | 100.00 | AL009126.3 |
| KPHONNAB_1 | 586303 | 587949 | vmlR | ARO:3004476 | vmlR | 98.91 | 100.18 | NC_000964.3 |
| KPHONNAB_1 | 334718 | 335311 | tmrB | ARO:3003059 | tmrB | 99.49 | 100.00 | AL009126.3 |
| KPHONNAB_1 | 284215 | 285648 | lmrB | ARO:3002813 | lmrB | 100.00 | 100.00 | JYFL01000006.1 |
| KPHONNAB_1 | 271402 | 272322 | mphK | ARO:3004541 | mphK | 98.69 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KPHONNAB_1 | 4002670 | 4004046 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 98.84 | 100.00 | D12567 |
| KPHONNAB_1 | 2507443 | 2508297 | aadK | Streptomycin | 98.83 | 100.00 | M26879 |
| KPHONNAB_1 | 271402 | 272322 | mph(K) | Spiramycin, Telithromycin | 98.26 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KPHONNAB_1 | 4002673 | 4004046 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 98.91 | 100.00 | WP_063856081.1 |
| KPHONNAB_1 | 586306 | 587949 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.91 | 100.00 | WP_003234144.1 |
| KPHONNAB_1 | 271402 | 272319 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.69 | 100.00 | WP_003246254.1 |
| KPHONNAB_1 | 2507446 | 2508297 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| KPHONNAB_1 | 4000155 | 4000673 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.17 | 100.00 | WP_003242546.1 |
| KPHONNAB_1 | 1951216 | 1953804 | rphC | rifamycin-inactivating phosphotransferase RphC | INTERNAL_STOP | 80.14 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| KPHONNAB_1 | 3508067 | 3509248 | capB | 0.0 | Capsule | Immune modulation | 99.75 | 100.00 | NP_391471 |
| KPHONNAB_1 | 3507603 | 3508052 | capC | 0.0 | Capsule | Immune modulation | 99.56 | 100.00 | NP_391470 |
| KPHONNAB_1 | 3063429 | 3064214 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| KPHONNAB_1 | 3052437 | 3059573 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.31 | 100.00 | NP_391076 |
| KPHONNAB_1 | 3506442 | 3507584 | capA | 0.0 | Capsule | Immune modulation | 99.21 | 100.00 | NP_391469 |
| KPHONNAB_1 | 3062207 | 3063403 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.08 | 100.00 | NP_391079 |
| KPHONNAB_1 | 1901752 | 1903515 | dep/capD | 0.0 | Capsule | Immune modulation | 98.92 | 100.00 | NP_389723 |
| KPHONNAB_1 | 2065011 | 2065652 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 98.91 | 100.00 | NP_390062 |
| KPHONNAB_1 | 3059593 | 3060531 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.30 | 100.00 | NP_391077 |
| KPHONNAB_1 | 3060559 | 3062178 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.41 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KPHONNAB_1 | 132415 | 133551 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| KPHONNAB_1 | 18600 | 19469 | pdxS | 3.01e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| KPHONNAB_1 | 1680330 | 1681106 | CodY | 3.29e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| KPHONNAB_1 | 3353356 | 3353925 | ClpP | 2.44e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |