Genome ID：GCA_004119775.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
12	10	4	16.12

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
PKNAILHA_1	2632748	2633602	aadK	ARO:3002627	aadK	97.89	100.00	AL009126.1
PKNAILHA_1	2614015	2615217	blt	ARO:3003006	blt	99.75	100.00	L32599.1
PKNAILHA_1	2441353	2442522	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
PKNAILHA_1	1402436	1402753	ykkD	ARO:3003064	ykkD	98.10	100.00	AL009126.1
PKNAILHA_1	1402098	1402436	ykkC	ARO:3003063	ykkC	98.21	100.00	AL009126.1
PKNAILHA_1	904367	906937	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.65	100.00	AL009126.3
PKNAILHA_1	613951	615579	vmlR	ARO:3004476	vmlR	98.52	99.09	NC_000964.3
PKNAILHA_1	292209	293642	lmrB	ARO:3002813	lmrB	98.95	100.00	JYFL01000006.1
PKNAILHA_1	279396	280316	mphK	ARO:3004541	mphK	98.37	100.00	CP010314.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
PKNAILHA_1	4196797	4198173	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	99.35	100.00	X08034
PKNAILHA_1	2632750	2633602	aadK	Streptomycin	98.59	99.77	M26879
PKNAILHA_1	279396	280316	mph(K)	Spiramycin, Telithromycin	97.72	100.00	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
PKNAILHA_1	4196800	4198173	tet(L)	tetracycline efflux MFS transporter Tet(L)	BLASTX	99.13	100.00	WP_003242953.1
PKNAILHA_1	613954	615579	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	98.52	98.90	WP_003234144.1
PKNAILHA_1	279396	280313	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	98.37	100.00	WP_003246254.1
PKNAILHA_1	2632751	2633602	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	97.89	100.00	WP_003229862.1
PKNAILHA_1	4194298	4194816	satA	streptothricin N-acetyltransferase SatA	BLASTX	90.17	100.00	WP_003242546.1
PKNAILHA_1	1994413	1997010	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	80.71	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
PKNAILHA_1	3691681	3692862	capB	0.0	Capsule	Immune modulation	99.66	100.00	NP_391471
PKNAILHA_1	3690056	3691198	capA	0.0	Capsule	Immune modulation	99.65	100.00	NP_391469
PKNAILHA_1	2242552	2243193	hlyIII	0.0	Hemolysin III	Exotoxin	99.53	100.00	NP_390062
PKNAILHA_1	3233665	3234450	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.49	100.00	NP_391080
PKNAILHA_1	3691217	3691666	capC	0.0	Capsule	Immune modulation	99.33	100.00	NP_391470
PKNAILHA_1	1945327	1947090	dep/capD	0.0	Capsule	Immune modulation	99.21	100.00	NP_389723
PKNAILHA_1	3230795	3232414	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	98.64	100.00	NP_391078
PKNAILHA_1	3222673	3229809	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	98.38	100.00	NP_391076
PKNAILHA_1	3229829	3230767	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	98.08	100.00	NP_391077
PKNAILHA_1	3232443	3233639	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	98.00	100.00	NP_391079

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
PKNAILHA_1	132395	133531	tufA	0.0	elongation factor Tu	85.75	95.69	AHM69299
PKNAILHA_1	18663	19532	pdxS	3.14e-149	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
PKNAILHA_1	1718183	1718959	CodY	3.43e-124	nutrient-responsive regulator	81.08	100.00	ACJ80679
PKNAILHA_1	3533674	3534243	ClpP	2.54e-98	part of proteolytic complex	81.05	97.44	BAB94595