Genome ID:GCA_004119875.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 10 | 4 | 16.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AILPGBCH_1 | 2482390 | 2483244 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| AILPGBCH_1 | 2465291 | 2466493 | blt | ARO:3003006 | blt | 99.25 | 100.00 | L32599.1 |
| AILPGBCH_1 | 2286639 | 2287808 | bmr | ARO:3003007 | bmr | 99.49 | 100.00 | M33768.1 |
| AILPGBCH_1 | 1385613 | 1385930 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| AILPGBCH_1 | 1385275 | 1385613 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| AILPGBCH_1 | 886200 | 888770 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.65 | 100.00 | AL009126.3 |
| AILPGBCH_1 | 587482 | 589128 | vmlR | ARO:3004476 | vmlR | 98.91 | 100.18 | NC_000964.3 |
| AILPGBCH_1 | 334749 | 335342 | tmrB | ARO:3003059 | tmrB | 99.49 | 100.00 | AL009126.3 |
| AILPGBCH_1 | 284254 | 285687 | lmrB | ARO:3002813 | lmrB | 100.00 | 100.00 | JYFL01000006.1 |
| AILPGBCH_1 | 271442 | 272362 | mphK | ARO:3004541 | mphK | 99.35 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| AILPGBCH_1 | 271442 | 272362 | mph(K) | Spiramycin, Telithromycin | 99.02 | 100.00 | NC_000964 |
| AILPGBCH_1 | 2482390 | 2483244 | aadK | Streptomycin | 98.83 | 100.00 | M26879 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AILPGBCH_1 | 271442 | 272359 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 99.35 | 100.00 | WP_003246254.1 |
| AILPGBCH_1 | 587485 | 589128 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.91 | 100.00 | WP_003234144.1 |
| AILPGBCH_1 | 2482393 | 2483244 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| AILPGBCH_1 | 4000190 | 4000708 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 91.91 | 100.00 | WP_003242546.1 |
| AILPGBCH_1 | 1972264 | 1974852 | rphC | rifamycin-inactivating phosphotransferase RphC | INTERNAL_STOP | 80.25 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| AILPGBCH_1 | 3081736 | 3088872 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.71 | 100.00 | NP_391076 |
| AILPGBCH_1 | 3509942 | 3510391 | capC | 0.0 | Capsule | Immune modulation | 99.56 | 100.00 | NP_391470 |
| AILPGBCH_1 | 3510406 | 3511587 | capB | 0.0 | Capsule | Immune modulation | 99.49 | 100.00 | NP_391471 |
| AILPGBCH_1 | 3092728 | 3093513 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| AILPGBCH_1 | 3508781 | 3509923 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| AILPGBCH_1 | 3091506 | 3092702 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.08 | 100.00 | NP_391079 |
| AILPGBCH_1 | 1921682 | 1923445 | dep/capD | 0.0 | Capsule | Immune modulation | 98.92 | 100.00 | NP_389723 |
| AILPGBCH_1 | 2086035 | 2086676 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 98.91 | 100.00 | NP_390062 |
| AILPGBCH_1 | 3088892 | 3089830 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.30 | 100.00 | NP_391077 |
| AILPGBCH_1 | 3089858 | 3091477 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.41 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| AILPGBCH_1 | 132497 | 133633 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| AILPGBCH_1 | 18600 | 19469 | pdxS | 2.99e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| AILPGBCH_1 | 1701132 | 1701908 | CodY | 3.27e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| AILPGBCH_1 | 3355450 | 3356019 | ClpP | 2.42e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |