Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NEJFNINO_1 | 2606997 | 2608916 | tet(M) | ARO:3000186 | tet(M) | 95.93 | 100.00 | AB039845.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| NEJFNINO_1 | 2606997 | 2608916 | tet(M) | Doxycycline, Tetracycline, Minocycline | 99.90 | 100.00 | X04388 |
| NEJFNINO_1 | 2619945 | 2621162 | mef(A) | Erythromycin, Azithromycin | 98.44 | 100.00 | HG423652 |
| NEJFNINO_1 | 2621283 | 2622746 | msr(D) | Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 92.55 | 100.00 | AF227520 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NEJFNINO_1 | 2606997 | 2608913 | tet(M) | tetracycline resistance ribosomal protection protein Tet(M) | BLASTX | 99.84 | 100.00 | WP_002414694.1 |
| NEJFNINO_1 | 2619945 | 2621159 | mef(A) | macrolide efflux MFS transporter Mef(A) | BLASTX | 98.77 | 100.00 | WP_058621816.1 |
| NEJFNINO_1 | 2621283 | 2622743 | msr(D) | ABC-F type ribosomal protection protein Msr(D) | BLASTX | 93.02 | 100.00 | WP_000420313.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||