Genome ID:GCA_004294535.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1110716.43

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
NCILFEGH_10689271690125aadKARO:3002627aadK98.59100.00AL009126.1
NCILFEGH_10648846650048bltARO:3003006blt99.50100.00L32599.1
NCILFEGH_10468208469377bmrARO:3003007bmr99.49100.00M33768.1
NCILFEGH_15423903424220ykkDARO:3003064ykkD98.10100.00AL009126.1
NCILFEGH_15423565423903ykkCARO:3003063ykkC98.21100.00AL009126.1
NCILFEGH_16297372299942Bacillus subtilis mprFARO:3003324Bsub_mprF99.53100.00AL009126.3
NCILFEGH_17212517214163vmlRARO:3004476vmlR98.91100.18NC_000964.3
NCILFEGH_18108611109531mphKARO:3004541mphK97.06100.00CP010314.1
NCILFEGH_189528196720lmrBARO:3002813lmrB99.58100.42JYFL01000006.1
NCILFEGH_184555946152tmrBARO:3003059tmrB97.97100.00AL009126.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
NCILFEGH_10689271690125aadKStreptomycin98.83100.00M26879
NCILFEGH_18108611109531mph(K)Spiramycin, Telithromycin97.0799.89NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
NCILFEGH_17212520214163vmlRABC-F type ribosomal protection protein VmlRBLASTX98.91100.00WP_003234144.1
NCILFEGH_10689274690125aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.59100.00WP_003229862.1
NCILFEGH_18108614109531mphKmacrolide 2'-phosphotransferase MphKBLASTX97.06100.00WP_003246254.1
NCILFEGH_10175117177714rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.52100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
NCILFEGH_14947381948166dhbA0.0BacillibactinNutritional/Metabolic factor99.62100.00NP_391080
NCILFEGH_14536598537779capB0.0CapsuleImmune modulation99.41100.00NP_391471
NCILFEGH_14537794538243capC0.0CapsuleImmune modulation99.33100.00NP_391470
NCILFEGH_10268615269256hlyIII0.0Hemolysin IIIExotoxin99.22100.00NP_390062
NCILFEGH_14538262539404capA0.0CapsuleImmune modulation99.04100.00NP_391469
NCILFEGH_14948192949388dhbC0.0BacillibactinNutritional/Metabolic factor99.00100.00NP_391079
NCILFEGH_14951064952002dhbB0.0BacillibactinNutritional/Metabolic factor98.72100.00NP_391077
NCILFEGH_14952022959158dhbF0.0BacillibactinNutritional/Metabolic factor98.61100.00NP_391076
NCILFEGH_10129385131148dep/capD0.0CapsuleImmune modulation98.53100.00NP_389723
NCILFEGH_14949417951036dhbE0.0BacillibactinNutritional/Metabolic factor98.46100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
NCILFEGH_192810326967tufA0.0elongation factor Tu85.7595.69AHM69299
NCILFEGH_2143565225pdxS1.11e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
NCILFEGH_15735749736525CodY7.66e-125nutrient-responsive regulator81.08100.00ACJ80679
NCILFEGH_14694222693653ClpP6.38e-99part of proteolytic complex81.0597.44BAB94595
NCILFEGH_15275728276120spxA16.02e-70redox-responsive transcription factor83.97100.00AAF21893
NCILFEGH_15275728276120spx3.59e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
NCILFEGH_203470934467SpoVG7.51e-39RNA-binding protein81.4879.41AAT02994
NCILFEGH_17155982156179CspA1.05e-31cold shock protein90.91100.00CAA62903