Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 1 | 5.10 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ICPIJMHM_1 | 2589798 | 2591723 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| ICPIJMHM_1 | 2584788 | 2585588 | ErmF | ARO:3000498 | ErmF | 98.87 | 100.00 | M17124.1 |
| ICPIJMHM_1 | 1485587 | 1486552 | CfxA2 | ARO:3003002 | CfxA2 | 100.00 | 100.00 | AF118110.1 |
| ICPIJMHM_1 | 1071998 | 1072963 | CfxA2 | ARO:3003002 | CfxA2 | 100.00 | 100.00 | AF118110.1 |
| ICPIJMHM_1 | 255155 | 257080 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ICPIJMHM_1 | 1071998 | 1072963 | cfxA3 | Ampicillin | 99.90 | 100.00 | AF472622 |
| ICPIJMHM_1 | 1071998 | 1072963 | cfxA4 | Unknown Beta-lactam | 99.90 | 100.00 | AY769933 |
| ICPIJMHM_1 | 1071998 | 1072963 | cfxA5 | Unknown Beta-lactam | 99.90 | 100.00 | AY769934 |
| ICPIJMHM_1 | 1071998 | 1072963 | cfxA | Cefoxitin, Ampicillin | 99.90 | 100.00 | U38243 |
| ICPIJMHM_1 | 255155 | 257080 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| ICPIJMHM_1 | 2584788 | 2585588 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.75 | 100.00 | M17808 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ICPIJMHM_1 | 1072001 | 1072963 | cfxA | CfxA family broad-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_004339683.1 |
| ICPIJMHM_1 | 1485590 | 1486552 | cfxA | CfxA family broad-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_004339683.1 |
| ICPIJMHM_1 | 255155 | 257077 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| ICPIJMHM_1 | 2589798 | 2591720 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| ICPIJMHM_1 | 2584788 | 2585585 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.25 | 100.00 | WP_002682030.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ICPIJMHM_1 | 4092507 | 4090927 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |