Genome ID:GCA_004421045.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
2244.90

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
KJPFCEJH_113015741302623clbAARO:3002814clbA99.43100.00CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
KJPFCEJH_113015881302623cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin88.8098.67KR610408
KJPFCEJH_133665953367971tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline87.00100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
KJPFCEJH_113015771302623clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbABLASTX99.43100.00WP_012116915.1
KJPFCEJH_133665953367965tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX86.2199.78WP_003242953.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
KJPFCEJH_123509902352171capB0.0CapsuleImmune modulation81.9699.66NP_391471
KJPFCEJH_123521862352635capC7.31e-112CapsuleImmune modulation83.3799.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
KJPFCEJH_117344831733347tufA0.0elongation factor Tu86.8195.69AHM69299
KJPFCEJH_118491571848288pdxS3.54e-150encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
KJPFCEJH_1192944192168CodY5.02e-124nutrient-responsive regulator81.08100.00ACJ80679
KJPFCEJH_127648702765742lipA (SAUSA300_0829)1.36e-161lipoic acid synthetase80.8295.41ABD22039