Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 8 | 0 | 0 | 8.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LJNPCMFO_11 | 45106 | 45996 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
| LJNPCMFO_86 | 21005 | 22210 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| LJNPCMFO_22 | 3614 | 4477 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
| LJNPCMFO_22 | 2302 | 3438 | tet(X) | ARO:3000205 | tet(X) | 99.47 | 97.42 | M37699.1 |
| LJNPCMFO_22 | 964 | 2103 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
| LJNPCMFO_76 | 777 | 2405 | tet(Q) | ARO:3000191 | tet(Q) | 97.42 | 82.65 | Z21523.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| LJNPCMFO_22 | 2272 | 3438 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.83 | 100.00 | M37699 |
| LJNPCMFO_22 | 78 | 658 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.83 | 72.53 | M62487 |
| LJNPCMFO_76 | 825 | 2407 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 98.99 | 82.19 | X58717 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LJNPCMFO_22 | 3614 | 4474 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| LJNPCMFO_11 | 45109 | 45996 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| LJNPCMFO_22 | 2272 | 3435 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | EXACTX | 100.00 | 100.00 | WP_008651082.1 |
| LJNPCMFO_86 | 20504 | 20980 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | BLASTX | 100.00 | 93.53 | WP_004308783.1 |
| LJNPCMFO_22 | 964 | 2100 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| LJNPCMFO_86 | 21008 | 22210 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| LJNPCMFO_22 | 80 | 658 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | PARTIALX | 99.48 | 72.56 | WP_063844771.1 |
| LJNPCMFO_76 | 825 | 2405 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | PARTIAL_CONTIG_ENDX | 99.05 | 82.22 | WP_004293868.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||