Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 1 | 3.16 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ICHEIMGH_1 | 1955134 | 1957059 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| ICHEIMGH_1 | 298664 | 299464 | ErmF | ARO:3000498 | ErmF | 97.37 | 100.00 | M17124.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ICHEIMGH_1 | 1955134 | 1957059 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| ICHEIMGH_1 | 298664 | 299464 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.75 | 100.00 | M62487 |
| ICHEIMGH_1 | 55985 | 56935 | cfxA3 | Ampicillin | 86.01 | 98.34 | AF472622 |
| ICHEIMGH_1 | 55985 | 56935 | cfxA4 | Unknown Beta-lactam | 86.01 | 98.34 | AY769933 |
| ICHEIMGH_1 | 55985 | 56935 | cfxA5 | Unknown Beta-lactam | 86.01 | 98.34 | AY769934 |
| ICHEIMGH_1 | 55985 | 56935 | cfxA | Cefoxitin, Ampicillin | 86.01 | 98.34 | U38243 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ICHEIMGH_1 | 1955137 | 1957059 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| ICHEIMGH_1 | 298664 | 299461 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.25 | 100.00 | WP_063844771.1 |
| ICHEIMGH_1 | 55984 | 56937 | cfxA | CfxA family broad-spectrum class A beta-lactamase | BLASTX | 83.65 | 99.07 | WP_004339683.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ICHEIMGH_1 | 550755 | 552335 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |