Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 2 | 4 | 6.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CHJJMOPI_2 | 1423769 | 1424815 | clbA | ARO:3002814 | clbA | 92.77 | 99.71 | CP006845.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CHJJMOPI_2 | 1423772 | 1424815 | cfr(B) | Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin | 88.90 | 99.33 | KR610408 |
| CHJJMOPI_1 | 1363456 | 1364832 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 87.15 | 100.00 | X08034 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CHJJMOPI_2 | 1423772 | 1424815 | clbA | 23S rRNA (adenine(2503)-C(8))-methyltransferase ClbA | BLASTX | 92.24 | 99.71 | WP_012116915.1 |
| CHJJMOPI_1 | 1363456 | 1364826 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 86.43 | 99.78 | WP_003242953.1 |
| CHJJMOPI_2 | 1426566 | 1427084 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 82.66 | 100.00 | WP_003242546.1 |
| CHJJMOPI_2 | 5295 | 7892 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.06 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| CHJJMOPI_1 | 483570 | 484751 | capB | 0.0 | Capsule | Immune modulation | 81.87 | 99.66 | NP_391471 |
| CHJJMOPI_1 | 484766 | 485215 | capC | 7.61e-114 | Capsule | Immune modulation | 83.59 | 99.78 | NP_391470 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CHJJMOPI_2 | 1789328 | 1788192 | tufA | 0.0 | elongation factor Tu | 86.54 | 95.69 | AHM69299 |
| CHJJMOPI_2 | 1888862 | 1887993 | pdxS | 7.46e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 84.83 | 98.31 | ACE61268 |
| CHJJMOPI_2 | 316772 | 315996 | CodY | 1.57e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| CHJJMOPI_2 | 759363 | 758971 | spxA1 | 2.48e-69 | redox-responsive transcription factor | 83.21 | 100.00 | AAF21893 |