Genome ID:GCA_008016915.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 2 | 2.83 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JEPAAJIE_17 | 15394 | 17319 | tet(M) | ARO:3000186 | tet(M) | 98.13 | 100.31 | AB039845.1 |
| JEPAAJIE_17 | 13808 | 15184 | tet(L) | ARO:3000179 | tet(L) | 99.13 | 100.00 | M11036.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JEPAAJIE_17 | 13808 | 15184 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 99.78 | 100.00 | M29725 |
| JEPAAJIE_17 | 15394 | 17319 | tet(M) | Doxycycline, Tetracycline, Minocycline | 99.12 | 100.00 | X75073 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JEPAAJIE_17 | 13811 | 15184 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 99.34 | 100.00 | WP_001574277.1 |
| JEPAAJIE_17 | 15397 | 17319 | tet(M) | tetracycline resistance ribosomal protection protein Tet(M) | BLASTX | 98.91 | 100.00 | WP_000691736.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JEPAAJIE_9 | 36020 | 36727 | WalR | 2.18e-116 | transcriptional regulatory protein | 85.59 | 100.43 | EPH95667 |
| JEPAAJIE_2 | 162601 | 162798 | CspR | 3.87e-28 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| JEPAAJIE_2 | 162601 | 162795 | CspA | 1.89e-27 | cold shock protein | 81.54 | 98.48 | CAA62903 |