Genome ID:GCA_008017555.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
4267.48

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
FGIHAILE_9334704335750clbAARO:3002814clbA92.7799.71CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
FGIHAILE_9334704335747cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin88.9099.33KR610408
FGIHAILE_8361985363361tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline87.36100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
FGIHAILE_9334704335747clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbABLASTX92.2499.71WP_012116915.1
FGIHAILE_8361985363355tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX87.0999.78WP_003242953.1
FGIHAILE_9332435332953satAstreptothricin N-acetyltransferase SatABLASTX82.66100.00WP_003242546.1
FGIHAILE_611126511115248rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.06100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
FGIHAILE_7376623377804capB0.0CapsuleImmune modulation81.8799.66NP_391471
FGIHAILE_7377819378268capC3.62e-114CapsuleImmune modulation83.5999.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
FGIHAILE_123177432910tufA0.0elongation factor Tu86.5495.69AHM69299
FGIHAILE_1445745443pdxS6.52e-153encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
FGIHAILE_6740621741397CodY1.05e-124nutrient-responsive regulator81.08100.00ACJ80679
FGIHAILE_6260544260936spxA11.66e-69redox-responsive transcription factor83.21100.00AAF21893
FGIHAILE_9318202318399CspA5.86e-32cold shock protein92.42100.00CAA62903
FGIHAILE_8702843702649CspD2.07e-27cold shock protein80.0098.48CAC99957
FGIHAILE_8702843702646CspB4.30e-27cold shock protein80.30100.00CAD00094
FGIHAILE_9318202318396CspR2.91e-26cold shock protein80.0098.48AAO82613