Genome ID:GCA_008017565.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
4267.48

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
HBABFBKG_112783928885clbAARO:3002814clbA92.7799.71CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
HBABFBKG_112784228885cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin88.9099.33KR610408
HBABFBKG_10444384445760tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline87.36100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
HBABFBKG_112784228885clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbABLASTX92.2499.71WP_012116915.1
HBABFBKG_10444390445760tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX87.0999.78WP_003242953.1
HBABFBKG_113063631154satAstreptothricin N-acetyltransferase SatABLASTX82.66100.00WP_003242546.1
HBABFBKG_810740891076686rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.06100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
HBABFBKG_9376584377765capB0.0CapsuleImmune modulation81.8799.66NP_391471
HBABFBKG_9377780378229capC3.90e-114CapsuleImmune modulation83.5999.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
HBABFBKG_153177332909tufA0.0elongation factor Tu86.5495.69AHM69299
HBABFBKG_345745443pdxS6.52e-153encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
HBABFBKG_8702724703500CodY1.02e-124nutrient-responsive regulator81.08100.00ACJ80679
HBABFBKG_8260544260936spxA11.61e-69redox-responsive transcription factor83.21100.00AAF21893
HBABFBKG_114538745190CspA5.55e-32cold shock protein92.42100.00CAA62903
HBABFBKG_10104902105096CspD1.63e-27cold shock protein80.0098.48CAC99957
HBABFBKG_10104902105099CspB3.38e-27cold shock protein80.30100.00CAD00094
HBABFBKG_114538745193CspR2.75e-26cold shock protein80.0098.48AAO82613