Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 9 | 0 | 1 | 9.06 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CLPDODJI_8 | 120980 | 122185 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| CLPDODJI_27 | 6990 | 8915 | tet(Q) | ARO:3000191 | tet(Q) | 96.26 | 97.56 | Z21523.1 |
| CLPDODJI_31 | 1083 | 3008 | tet(Q) | ARO:3000191 | tet(Q) | 89.08 | 97.56 | Z21523.1 |
| CLPDODJI_31 | 2 | 796 | ErmF | ARO:3000498 | ErmF | 97.73 | 99.25 | M17124.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CLPDODJI_21 | 52242 | 53108 | ant(6)-Ia | Streptomycin | 100.00 | 100.00 | KF864551 |
| CLPDODJI_27 | 6990 | 8915 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.79 | 100.00 | L33696 |
| CLPDODJI_31 | 1 | 796 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.25 | 99.38 | M17808 |
| CLPDODJI_45 | 1350 | 2567 | mef(A) | Erythromycin, Azithromycin | 95.07 | 100.00 | AF227520 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CLPDODJI_21 | 53262 | 54035 | aad9 | ANT(9) family aminoglycoside nucleotidyltransferase | EXACTX | 100.00 | 100.00 | WP_002578722.1 |
| CLPDODJI_21 | 52245 | 53108 | aadE | aminoglycoside 6-adenylyltransferase AadE | EXACTX | 100.00 | 100.00 | WP_001255868.1 |
| CLPDODJI_8 | 122210 | 122719 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| CLPDODJI_8 | 120980 | 122182 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| CLPDODJI_27 | 6990 | 8912 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.38 | 100.00 | WP_063856407.1 |
| CLPDODJI_21 | 258 | 1097 | estT | macrolide hydrolase EstT | BLASTX | 98.58 | 100.00 | WP_185148407.1 |
| CLPDODJI_45 | 1347 | 2567 | mef(A) | macrolide efflux MFS transporter Mef(A) | INTERNAL_STOP | 98.53 | 99.75 | WP_012102963.1 |
| CLPDODJI_31 | 2 | 793 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.11 | 99.25 | WP_002682030.1 |
| CLPDODJI_31 | 1083 | 3005 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 89.55 | 100.00 | WP_063856407.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CLPDODJI_13 | 51093 | 52673 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |