Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 9 | 0 | 0 | 9.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CDCLAIEN_54 | 7505 | 8710 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| CDCLAIEN_128 | 5290 | 6072 | ErmF | ARO:3000498 | ErmF | 98.41 | 97.74 | M17124.1 |
| CDCLAIEN_128 | 3059 | 4984 | tet(Q) | ARO:3000191 | tet(Q) | 89.08 | 97.56 | Z21523.1 |
| CDCLAIEN_120 | 3 | 1583 | tet(Q) | ARO:3000191 | tet(Q) | 96.96 | 80.21 | Z21523.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CDCLAIEN_56 | 8842 | 9708 | ant(6)-Ia | Streptomycin | 100.00 | 100.00 | KF864551 |
| CDCLAIEN_120 | 1 | 1583 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.81 | 82.19 | L33696 |
| CDCLAIEN_128 | 5271 | 6072 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.38 | 100.00 | M17808 |
| CDCLAIEN_422 | 15294 | 16511 | mef(A) | Erythromycin, Azithromycin | 95.07 | 100.00 | AF227520 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CDCLAIEN_56 | 7915 | 8688 | aad9 | ANT(9) family aminoglycoside nucleotidyltransferase | EXACTX | 100.00 | 100.00 | WP_002578722.1 |
| CDCLAIEN_56 | 8842 | 9705 | aadE | aminoglycoside 6-adenylyltransferase AadE | EXACTX | 100.00 | 100.00 | WP_001255868.1 |
| CDCLAIEN_54 | 8735 | 9244 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| CDCLAIEN_120 | 3 | 1583 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | PARTIAL_CONTIG_ENDX | 99.62 | 82.22 | WP_063856407.1 |
| CDCLAIEN_54 | 7505 | 8707 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| CDCLAIEN_128 | 5317 | 6072 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.81 | 94.74 | WP_002682030.1 |
| CDCLAIEN_337 | 245 | 1084 | estT | macrolide hydrolase EstT | BLASTX | 98.58 | 100.00 | WP_185148407.1 |
| CDCLAIEN_422 | 15294 | 16514 | mef(A) | macrolide efflux MFS transporter Mef(A) | INTERNAL_STOP | 98.53 | 99.75 | WP_012102963.1 |
| CDCLAIEN_128 | 3062 | 4984 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 89.55 | 100.00 | WP_063856407.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||