Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HPCHFIGG_20 | 171540 | 173489 | tet(O) | ARO:3000190 | tet(O) | 99.06 | 101.56 | M18896.2 |
| HPCHFIGG_6 | 4587 | 6506 | tet(32) | ARO:3000196 | tet(32) | 98.75 | 100.00 | EU722333.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HPCHFIGG_6 | 4587 | 6506 | tet(32) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | EF626943 |
| HPCHFIGG_20 | 171540 | 173449 | tet(O) | Doxycycline, Tetracycline, Minocycline | 99.69 | 99.48 | M18896 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HPCHFIGG_6 | 4587 | 6503 | tet(32) | tetracycline resistance ribosomal protection protein Tet(32) | EXACTX | 100.00 | 100.00 | WP_002602099.1 |
| HPCHFIGG_20 | 171543 | 173450 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | BLASTX | 99.37 | 99.53 | WP_044666383.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||