Genome ID:GCA_008807995.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1244.58

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
GCHGDONE_111249221125971clbAARO:3002814clbA100.00100.00CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
GCHGDONE_111249361125971cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin89.0098.67KR610408

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
GCHGDONE_111249251125971clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbAEXACTX100.00100.00WP_012116915.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
GCHGDONE_121558042156985capB0.0CapsuleImmune modulation81.9699.66NP_391471
GCHGDONE_121570002157449capC3.11e-115CapsuleImmune modulation83.8199.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
GCHGDONE_115316731530537tufA0.0elongation factor Tu86.8195.69AHM69299
GCHGDONE_116461661645297pdxS3.27e-150encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
GCHGDONE_16625265476CodY4.62e-124nutrient-responsive regulator81.08100.00ACJ80679
GCHGDONE_125189822519854lipA (SAUSA300_0829)1.26e-161lipoic acid synthetase80.8295.41ABD22039