Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CHNEIIPF_207 | 24256 | 25842 | tet(Q) | ARO:3000191 | tet(Q) | 88.43 | 80.37 | Z21523.1 |
| CHNEIIPF_207 | 22377 | 23513 | tet(X) | ARO:3000205 | tet(X) | 99.74 | 97.42 | M37699.1 |
| CHNEIIPF_207 | 21364 | 22164 | ErmF | ARO:3000498 | ErmF | 99.62 | 100.00 | M17124.1 |
| CHNEIIPF_209 | 2961 | 3851 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
| CHNEIIPF_120 | 644 | 2494 | tet(Q) | ARO:3000191 | tet(Q) | 96.75 | 93.91 | Z21523.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CHNEIIPF_207 | 21364 | 22164 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | M17808 |
| CHNEIIPF_207 | 22377 | 23543 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.91 | 100.00 | M37699 |
| CHNEIIPF_120 | 644 | 2494 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 96.11 | L33696 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CHNEIIPF_209 | 2964 | 3851 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| CHNEIIPF_207 | 21364 | 22161 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | EXACTX | 100.00 | 100.00 | WP_002682030.1 |
| CHNEIIPF_207 | 22380 | 23543 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| CHNEIIPF_120 | 644 | 2494 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.51 | 96.26 | WP_063856407.1 |
| CHNEIIPF_207 | 24259 | 25839 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | PARTIALX | 88.99 | 82.22 | WP_063856407.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||