Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LCFNKMFH_201 | 24560 | 26485 | tet(Q) | ARO:3000191 | tet(Q) | 95.48 | 97.56 | Z21523.1 |
| LCFNKMFH_49 | 6368 | 7933 | tet(Q) | ARO:3000191 | tet(Q) | 88.29 | 79.30 | Z21523.1 |
| LCFNKMFH_49 | 4489 | 5655 | tet(X) | ARO:3000205 | tet(X) | 99.74 | 100.00 | M37699.1 |
| LCFNKMFH_49 | 3476 | 4276 | ErmF | ARO:3000498 | ErmF | 99.62 | 100.00 | M17124.1 |
| LCFNKMFH_228 | 2857 | 3747 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| LCFNKMFH_49 | 3476 | 4276 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | M17808 |
| LCFNKMFH_49 | 4489 | 5655 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.91 | 100.00 | M37699 |
| LCFNKMFH_201 | 24560 | 26485 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 98.44 | 100.00 | L33696 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LCFNKMFH_228 | 2860 | 3747 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| LCFNKMFH_49 | 3476 | 4273 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | EXACTX | 100.00 | 100.00 | WP_002682030.1 |
| LCFNKMFH_49 | 4492 | 5655 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| LCFNKMFH_201 | 24560 | 26482 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 98.44 | 100.00 | WP_063856407.1 |
| LCFNKMFH_49 | 6371 | 7933 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | PARTIAL_CONTIG_ENDX | 88.87 | 81.28 | WP_063856407.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||