Genome ID:GCA_009020455.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 3 | 0 | 4.24 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NJOHDCCF_44 | 25002 | 25892 | CblA-1 | ARO:3002999 | CblA-1 | 99.32 | 100.00 | GQ343019.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| NJOHDCCF_222 | 262924 | 263874 | cfxA3 | Ampicillin | 86.12 | 98.34 | AF472622 |
| NJOHDCCF_214 | 11 | 687 | cfxA6 | Unknown Beta-lactam | 88.48 | 67.97 | GQ342996 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NJOHDCCF_44 | 25002 | 25889 | cblA | CblA family class A beta-lactamase | BLASTX | 99.32 | 100.00 | WP_005827792.1 |
| NJOHDCCF_214 | 2 | 739 | cfxA6 | broad-spectrum class A beta-lactamase CfxA6 | PARTIAL_CONTIG_ENDX | 86.99 | 76.88 | WP_117664257.1 |
| NJOHDCCF_222 | 262923 | 263876 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | BLASTX | 83.65 | 99.07 | WP_004348227.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| NJOHDCCF_268 | 2754 | 4319 | ECSMS35_RS25765 | 0.0 | Colicin E1 | Exotoxin | 95.21 | 99.94 | WP_000447001 |
| NJOHDCCF_176 | 725 | 1078 | ygeG | 1.69e-170 | ETT2 | Effector delivery system | 97.17 | 71.95 | NP_311735 |
| NJOHDCCF_56 | 1 | 1062 | espY3 | 0.0 | TTSS secreted effectors | Effector delivery system | 97.08 | 67.56 | WP_000978349 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NJOHDCCF_268 | 3117 | 4319 | virulence_ecoli | cea | Colicin E1 | 99.92 | 100.00 | CYCO01000082 |
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NJOHDCCF_56 | 1062 | 1 | EspY3 (ECs0472) | 0.0 | effector protein | 95.20 | 67.69 | BAB33895 |