Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 6 | 3 | 1 | 6.78 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GEKEEBPK_126 | 34092 | 36065 | tet(Q) | ARO:3000191 | tet(Q) | 96.35 | 100.00 | Z21523.1 |
| GEKEEBPK_97 | 10994 | 11728 | ErmG | ARO:3000522 | ErmG | 99.18 | 100.00 | L42817.1 |
| GEKEEBPK_59 | 332 | 1225 | leuO | ARO:3003843 | leuO | 99.33 | 94.59 | LR730402.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| GEKEEBPK_126 | 34092 | 36017 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| GEKEEBPK_97 | 10994 | 11728 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.32 | 100.00 | M15332 |
| GEKEEBPK_97 | 8759 | 10222 | msr(D) | Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 97.54 | 100.00 | AF274302 |
| GEKEEBPK_97 | 7419 | 8633 | mef(A) | Erythromycin, Azithromycin | 94.24 | 99.75 | AF227520 |
| GEKEEBPK_4 | 1514 | 2265 | cfxA6 | Unknown Beta-lactam | 86.45 | 75.40 | GQ342996 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GEKEEBPK_97 | 10994 | 11725 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | BLASTX | 99.59 | 100.00 | WP_063844791.1 |
| GEKEEBPK_126 | 34095 | 36017 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| GEKEEBPK_97 | 8759 | 10219 | msr(D) | ABC-F type ribosomal protection protein Msr(D) | BLASTX | 97.13 | 100.00 | WP_000420313.1 |
| GEKEEBPK_97 | 7419 | 8642 | mef(A) | macrolide efflux MFS transporter Mef(A) | BLASTX | 96.57 | 100.00 | WP_012102963.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| GEKEEBPK_9 | 519 | 2084 | ECSMS35_RS25765 | 0.0 | Colicin E1 | Exotoxin | 95.21 | 99.94 | WP_000447001 |
| GEKEEBPK_79 | 138 | 449 | sat | 6.70e-105 | Sat | Effector delivery system | 88.64 | 98.73 | - |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GEKEEBPK_9 | 519 | 1721 | virulence_ecoli | cea | Colicin E1 | 99.92 | 100.00 | CYCO01000082 |
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GEKEEBPK_63 | 402 | 1127 | artP | 1.65e-162 | arginine ABC transporter, ATP-binding protein | 96.69 | 100.00 | CBG87650 |