Genome ID:GCA_009103215.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
5005.00

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
LDMEIAJC_19056676530aadSARO:3004683aadS100.00100.00M72415.1
LDMEIAJC_19043555491tet(X)ARO:3000205tet(X)99.4797.42M37699.1
LDMEIAJC_19030174156tet(X1)ARO:3005166tet(X1)99.72105.57AJ311171.1
LDMEIAJC_19019112711ErmFARO:3000498ErmF97.74100.00M17124.1
LDMEIAJC_1034282401tet(Q)ARO:3000191tet(Q)96.65100.00Z21523.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
LDMEIAJC_19019112711erm(F)Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S99.88100.00M62487
LDMEIAJC_19043255491tet(X)Doxycycline, Tetracycline, Minocycline, Tigecycline99.83100.00M37699
LDMEIAJC_1034282353tet(Q)Doxycycline, Tetracycline, Minocycline99.58100.00L33696

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
LDMEIAJC_19056676527aadSaminoglycoside 6-adenylyltransferase AadSEXACTX100.00100.00WP_003013318.1
LDMEIAJC_19043255488tet(X2)tetracycline-inactivating monooxygenase Tet(X2)EXACTX100.00100.00WP_008651082.1
LDMEIAJC_19030174153tet(X1)tetracycline-inactivating monooxygenase Tet(X1)BLASTX99.74100.00WP_204376222.1
LDMEIAJC_19019142711erm(F)23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)BLASTX99.62100.00WP_063844771.1
LDMEIAJC_1034312353tet(Q)tetracycline resistance ribosomal protection protein Tet(Q)BLASTX98.91100.00WP_063856407.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
No hit found