Genome ID:GCA_009497815.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 10 | 4 | 16.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JDJBFPAO_1 | 4143555 | 4146125 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.65 | 100.00 | AL009126.3 |
| JDJBFPAO_1 | 3830303 | 3831946 | vmlR | ARO:3004476 | vmlR | 98.90 | 100.00 | NC_000964.3 |
| JDJBFPAO_1 | 3580350 | 3580943 | tmrB | ARO:3003059 | tmrB | 98.98 | 100.00 | AL009126.3 |
| JDJBFPAO_1 | 3529852 | 3531285 | lmrB | ARO:3002813 | lmrB | 99.37 | 100.00 | JYFL01000006.1 |
| JDJBFPAO_1 | 3517040 | 3517960 | mphK | ARO:3004541 | mphK | 99.67 | 100.00 | CP010314.1 |
| JDJBFPAO_1 | 1718216 | 1719070 | aadK | ARO:3002627 | aadK | 98.24 | 100.00 | AL009126.1 |
| JDJBFPAO_1 | 1701127 | 1702329 | blt | ARO:3003006 | blt | 99.50 | 100.00 | L32599.1 |
| JDJBFPAO_1 | 1527573 | 1528742 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| JDJBFPAO_1 | 426536 | 426853 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| JDJBFPAO_1 | 426198 | 426536 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JDJBFPAO_1 | 3517040 | 3517960 | mph(K) | Spiramycin, Telithromycin | 99.57 | 100.00 | NC_000964 |
| JDJBFPAO_1 | 1718216 | 1719070 | aadK | Streptomycin | 98.60 | 100.00 | M26879 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JDJBFPAO_1 | 3517040 | 3517957 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 99.67 | 100.00 | WP_003246254.1 |
| JDJBFPAO_1 | 3830306 | 3831946 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.90 | 100.00 | WP_003234144.1 |
| JDJBFPAO_1 | 1718219 | 1719070 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.24 | 100.00 | WP_003229862.1 |
| JDJBFPAO_1 | 3171781 | 3172299 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 93.06 | 100.00 | WP_003242546.1 |
| JDJBFPAO_1 | 1097965 | 1100562 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.71 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| JDJBFPAO_1 | 2683074 | 2684255 | capB | 0.0 | Capsule | Immune modulation | 99.75 | 100.00 | NP_391471 |
| JDJBFPAO_1 | 1330249 | 1330890 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.69 | 100.00 | NP_390062 |
| JDJBFPAO_1 | 2266787 | 2267572 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| JDJBFPAO_1 | 2262951 | 2263889 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391077 |
| JDJBFPAO_1 | 1052179 | 1053942 | dep/capD | 0.0 | Capsule | Immune modulation | 99.26 | 100.00 | NP_389723 |
| JDJBFPAO_1 | 2265565 | 2266761 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.91 | 100.00 | NP_391079 |
| JDJBFPAO_1 | 2681449 | 2682591 | capA | 0.0 | Capsule | Immune modulation | 98.78 | 100.00 | NP_391469 |
| JDJBFPAO_1 | 2682610 | 2683059 | capC | 0.0 | Capsule | Immune modulation | 98.67 | 100.00 | NP_391470 |
| JDJBFPAO_1 | 2255795 | 2262931 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.64 | 100.00 | NP_391076 |
| JDJBFPAO_1 | 2263917 | 2265536 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.59 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JDJBFPAO_1 | 3381177 | 3382313 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| JDJBFPAO_1 | 3221257 | 3222126 | pdxS | 3.10e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| JDJBFPAO_1 | 738036 | 738812 | CodY | 3.39e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| JDJBFPAO_1 | 2524736 | 2525305 | ClpP | 2.51e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |