Genome ID:GCA_009662275.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1410417.66

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
GDGJMGLJ_126732872674141aadKARO:3002627aadK98.94100.00AL009126.1
GDGJMGLJ_126545842655786bltARO:3003006blt99.50100.00L32599.1
GDGJMGLJ_124281572429326bmrARO:3003007bmr99.23100.00M33768.1
GDGJMGLJ_114567891457106ykkDARO:3003064ykkD99.05100.00AL009126.1
GDGJMGLJ_114564511456789ykkCARO:3003063ykkC100.00100.00AL009126.1
GDGJMGLJ_1960551963121Bacillus subtilis mprFARO:3003324Bsub_mprF99.88100.00AL009126.3
GDGJMGLJ_1649710651353vmlRARO:3004476vmlR98.54100.00NC_000964.3
GDGJMGLJ_1394393394986tmrBARO:3003059tmrB98.48100.00AL009126.3
GDGJMGLJ_1382788383438Streptococcus suis chloramphenicol acetyltransferaseARO:3004455Ssui_ACT_CHL94.91100.00AB080798.1
GDGJMGLJ_1341486342919lmrBARO:3002813lmrB99.37100.00JYFL01000006.1
GDGJMGLJ_1328669329589mphKARO:3004541mphK99.02100.00CP010314.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
GDGJMGLJ_1382788383438cat(pC194)Chloramphenicol100.00100.00NC_002013
GDGJMGLJ_126732872674141aadKStreptomycin99.30100.00M26879
GDGJMGLJ_141352544136630tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline98.77100.00D12567
GDGJMGLJ_1328669329589mph(K)Spiramycin, Telithromycin98.05100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
GDGJMGLJ_1382788383435catAtype A-9 chloramphenicol O-acetyltransferaseEXACTX100.00100.00WP_001010387.1
GDGJMGLJ_1328669329586mphKmacrolide 2'-phosphotransferase MphKBLASTX99.02100.00WP_003246254.1
GDGJMGLJ_126732902674141aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.94100.00WP_003229862.1
GDGJMGLJ_141352574136630tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX98.69100.00WP_063856081.1
GDGJMGLJ_1649713651353vmlRABC-F type ribosomal protection protein VmlRBLASTX98.54100.00WP_003234144.1
GDGJMGLJ_141327334133251satAstreptothricin N-acetyltransferase SatABLASTX90.17100.00WP_003242546.1
GDGJMGLJ_121244392127036rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.40100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
GDGJMGLJ_122289972229638hlyIII0.0Hemolysin IIIExotoxin100.00100.00NP_390062
GDGJMGLJ_136523053653486capB0.0CapsuleImmune modulation99.75100.00NP_391471
GDGJMGLJ_132270923234228dhbF0.0BacillibactinNutritional/Metabolic factor99.54100.00NP_391076
GDGJMGLJ_136506803651822capA0.0CapsuleImmune modulation99.39100.00NP_391469
GDGJMGLJ_132380843238869dhbA0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391080
GDGJMGLJ_136518413652290capC0.0CapsuleImmune modulation99.33100.00NP_391470
GDGJMGLJ_132342483235186dhbB0.0BacillibactinNutritional/Metabolic factor99.25100.00NP_391077
GDGJMGLJ_132368623238058dhbC0.0BacillibactinNutritional/Metabolic factor99.17100.00NP_391079
GDGJMGLJ_120743582076121dep/capD0.0CapsuleImmune modulation99.15100.00NP_389723
GDGJMGLJ_132352143236833dhbE0.0BacillibactinNutritional/Metabolic factor99.07100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
GDGJMGLJ_1132400133536tufA0.0elongation factor Tu84.9695.69AHM69299
GDGJMGLJ_11866519534pdxS3.09e-149encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
GDGJMGLJ_117665971767373CodY3.38e-124nutrient-responsive regulator81.08100.00ACJ80679
GDGJMGLJ_134909453491514ClpP2.51e-98part of proteolytic complex81.0597.44BAB94595