Genome ID:GCA_009662335.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 10 | 4 | 16.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KPMDFDCC_1 | 2555200 | 2556054 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| KPMDFDCC_1 | 2538121 | 2539323 | blt | ARO:3003006 | blt | 99.25 | 100.00 | L32599.1 |
| KPMDFDCC_1 | 2311353 | 2312522 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| KPMDFDCC_1 | 1404182 | 1404499 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| KPMDFDCC_1 | 1403844 | 1404182 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| KPMDFDCC_1 | 924261 | 926831 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 100.00 | 100.00 | AL009126.3 |
| KPMDFDCC_1 | 619212 | 620858 | vmlR | ARO:3004476 | vmlR | 98.91 | 100.18 | NC_000964.3 |
| KPMDFDCC_1 | 366908 | 367501 | tmrB | ARO:3003059 | tmrB | 99.49 | 100.00 | AL009126.3 |
| KPMDFDCC_1 | 316350 | 317783 | lmrB | ARO:3002813 | lmrB | 100.00 | 100.00 | JYFL01000006.1 |
| KPMDFDCC_1 | 303536 | 304456 | mphK | ARO:3004541 | mphK | 98.68 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KPMDFDCC_1 | 2555200 | 2556054 | aadK | Streptomycin | 98.83 | 100.00 | M26879 |
| KPMDFDCC_1 | 303536 | 304456 | mph(K) | Spiramycin, Telithromycin | 98.05 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KPMDFDCC_1 | 619215 | 620858 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.91 | 100.00 | WP_003234144.1 |
| KPMDFDCC_1 | 303536 | 304444 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.68 | 99.02 | WP_003246254.1 |
| KPMDFDCC_1 | 2555203 | 2556054 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| KPMDFDCC_1 | 4076255 | 4076773 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 91.91 | 100.00 | WP_003242546.1 |
| KPMDFDCC_1 | 1996812 | 1999400 | rphC | rifamycin-inactivating phosphotransferase RphC | INTERNAL_STOP | 80.25 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| KPMDFDCC_1 | 2110616 | 2111257 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
| KPMDFDCC_1 | 3185449 | 3186234 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.75 | 100.00 | NP_391080 |
| KPMDFDCC_1 | 3592471 | 3592920 | capC | 0.0 | Capsule | Immune modulation | 99.56 | 100.00 | NP_391470 |
| KPMDFDCC_1 | 3592935 | 3594116 | capB | 0.0 | Capsule | Immune modulation | 99.49 | 100.00 | NP_391471 |
| KPMDFDCC_1 | 1943672 | 1945435 | dep/capD | 0.0 | Capsule | Immune modulation | 99.32 | 100.00 | NP_389723 |
| KPMDFDCC_1 | 3591310 | 3592452 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| KPMDFDCC_1 | 3181613 | 3182551 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.15 | 100.00 | NP_391077 |
| KPMDFDCC_1 | 3184227 | 3185423 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.08 | 100.00 | NP_391079 |
| KPMDFDCC_1 | 3174457 | 3181593 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.99 | 100.00 | NP_391076 |
| KPMDFDCC_1 | 3182579 | 3184198 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.10 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KPMDFDCC_1 | 132495 | 133631 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| KPMDFDCC_1 | 18601 | 19470 | pdxS | 3.05e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| KPMDFDCC_1 | 1722310 | 1723086 | CodY | 3.33e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| KPMDFDCC_1 | 3437972 | 3438541 | ClpP | 2.47e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |