Genome ID：GCA_009665145.2

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
12	10	4	16.12

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
LDCDBPCC_1	3923383	3924303	mphK	ARO:3004541	mphK	98.04	100.00	CP010314.1
LDCDBPCC_1	3910050	3911483	lmrB	ARO:3002813	lmrB	100.00	100.00	JYFL01000006.1
LDCDBPCC_1	3860325	3860918	tmrB	ARO:3003059	tmrB	97.46	100.00	AL009126.3
LDCDBPCC_1	3600529	3602157	vmlR	ARO:3004476	vmlR	95.38	99.09	NC_000964.3
LDCDBPCC_1	3302671	3305241	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.77	100.00	AL009126.3
LDCDBPCC_1	2846348	2846686	ykkC	ARO:3003063	ykkC	99.11	100.00	AL009126.1
LDCDBPCC_1	2846031	2846348	ykkD	ARO:3003064	ykkD	98.10	100.00	AL009126.1
LDCDBPCC_1	1874601	1875770	bmr	ARO:3003007	bmr	99.23	100.00	M33768.1
LDCDBPCC_1	1690479	1691681	blt	ARO:3003006	blt	98.50	100.00	L32599.1
LDCDBPCC_1	1671528	1672382	aadK	ARO:3002627	aadK	97.54	100.00	AL009126.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
LDCDBPCC_1	1671528	1672382	aadK	Streptomycin	98.25	100.00	M26879
LDCDBPCC_1	3923383	3924303	mph(K)	Spiramycin, Telithromycin	97.39	100.00	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
LDCDBPCC_1	3923386	3924303	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	98.04	100.00	WP_003246254.1
LDCDBPCC_1	1671528	1672379	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	97.54	100.00	WP_003229862.1
LDCDBPCC_1	3600529	3602151	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	95.38	98.90	WP_003234144.1
LDCDBPCC_1	194665	195183	satA	streptothricin N-acetyltransferase SatA	BLASTX	90.75	100.00	WP_003242546.1
LDCDBPCC_1	2165475	2168072	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.29	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
LDCDBPCC_1	694443	695625	capB	0.0	Capsule	Immune modulation	99.41	100.00	NP_391471
LDCDBPCC_1	695640	696089	capC	0.0	Capsule	Immune modulation	99.33	100.00	NP_391470
LDCDBPCC_1	696108	697250	capA	0.0	Capsule	Immune modulation	99.04	100.00	NP_391469
LDCDBPCC_1	1118972	1119757	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	98.98	100.00	NP_391080
LDCDBPCC_1	2074741	2075382	hlyIII	0.0	Hemolysin III	Exotoxin	98.75	100.00	NP_390062
LDCDBPCC_1	1122655	1123593	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	98.72	100.00	NP_391077
LDCDBPCC_1	1119783	1120979	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	98.50	100.00	NP_391079
LDCDBPCC_1	1123613	1130743	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	98.32	99.99	NP_391076
LDCDBPCC_1	2211253	2213016	dep/capD	0.0	Capsule	Immune modulation	98.02	100.00	NP_389723
LDCDBPCC_1	1121008	1122627	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	97.59	100.00	NP_391078

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
LDCDBPCC_1	27922	26786	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
LDCDBPCC_1	141634	140765	pdxS	2.98e-149	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
LDCDBPCC_1	2537053	2536277	CodY	3.26e-124	nutrient-responsive regulator	81.08	100.00	ACJ80679
LDCDBPCC_1	852125	851556	ClpP	2.41e-98	part of proteolytic complex	81.05	97.44	BAB94595