Genome ID:GCA_009678425.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
3013.16

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
EOCOOGFF_66197066197866ErmFARO:3000498ErmF98.50100.00M17124.1
EOCOOGFF_11112662114636tet(Q)ARO:3000191tet(Q)100.0097.56Z21523.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
EOCOOGFF_11112662114587tet(Q)Doxycycline, Tetracycline, Minocycline100.00100.00Z21523
EOCOOGFF_66197066197866erm(F)Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S99.50100.00M17808
EOCOOGFF_715266353613cfxA3Ampicillin86.0198.34AF472622
EOCOOGFF_715266353613cfxA4Unknown Beta-lactam86.0198.34AY769933
EOCOOGFF_715266353613cfxA5Unknown Beta-lactam86.0198.34AY769934
EOCOOGFF_715266353613cfxACefoxitin, Ampicillin86.0198.34U38243

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
EOCOOGFF_11112665114587tet(Q)tetracycline resistance ribosomal protection protein Tet(Q)EXACTX100.00100.00WP_002560998.1
EOCOOGFF_66197066197863erm(F)23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)BLASTX98.87100.00WP_002682030.1
EOCOOGFF_715266153614cfxACfxA family broad-spectrum class A beta-lactamaseBLASTX83.6599.07WP_004339683.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
EOCOOGFF_70120012121592GroEL0.0folding of newly synthesized proteins, preventing misfolding and aggregation86.9196.70BAA04222