Genome ID：GCA_009716875.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
0	20	33	38.59

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
PCHDJPAE_26	1815	2546	STR_RS05260	0.0	Capsule	Immune modulation	94.40	100.00	WP_011227248
PCHDJPAE_33	87002	87853	rfbD	0.0	Capsule	Immune modulation	94.25	100.00	WP_014621820
PCHDJPAE_26	1815	2546	STU_RS14645	0.0	Capsule	Immune modulation	93.72	100.00	WP_011226048
PCHDJPAE_26	1815	2546	STER_RS05315	0.0	Capsule	Immune modulation	93.44	100.00	WP_011681176
PCHDJPAE_33	83931	84740	STU_RS16245	0.0	Capsule	Immune modulation	92.85	99.88	WP_002948020
PCHDJPAE_33	79918	81674	STU_RS16230	0.0	Capsule	Immune modulation	92.60	98.43	WP_011226325
PCHDJPAE_33	82726	83931	STU_RS16240	0.0	Capsule	Immune modulation	92.37	100.00	WP_011226326
PCHDJPAE_33	84724	85680	STU_RS16250	0.0	Capsule	Immune modulation	91.85	100.00	WP_011226328
PCHDJPAE_33	85677	86825	STU_RS16255	0.0	Capsule	Immune modulation	91.57	99.83	WP_041828290
PCHDJPAE_53	82560	84218	fbp54	0.0	FBPs	Adherence	91.14	99.94	WP_011227179
PCHDJPAE_26	354	1814	STER_RS05320	0.0	Capsule	Immune modulation	91.13	99.86	WP_011681177
PCHDJPAE_55	78581	79174	STR_RS05880	0.0	Capsule	Immune modulation	91.08	100.00	WP_011226149
PCHDJPAE_33	81671	82705	STU_RS16235	0.0	Capsule	Immune modulation	91.00	99.15	WP_002948022
PCHDJPAE_55	78581	79174	STER_RS06030	0.0	Capsule	Immune modulation	90.91	100.00	WP_011226149
PCHDJPAE_55	78581	79174	STU_RS15260	0.0	Capsule	Immune modulation	90.91	100.00	WP_011226149
PCHDJPAE_26	354	1814	STU_RS14650	0.0	Capsule	Immune modulation	90.51	100.00	WP_011226049
PCHDJPAE_33	139951	140856	cbpD	0.0	Autolysin	Exoenzyme	89.96	93.50	WP_082302295
PCHDJPAE_26	2555	3247	STU_RS14640	0.0	Capsule	Immune modulation	89.90	100.00	WP_011226047
PCHDJPAE_26	354	1814	STR_RS05265	0.0	Capsule	Immune modulation	89.83	100.00	WP_041827043
PCHDJPAE_26	2555	3247	STR_RS05255	0.0	Capsule	Immune modulation	89.61	100.00	WP_011227247
PCHDJPAE_26	2555	3247	STER_RS05310	0.0	Capsule	Immune modulation	89.47	100.00	WP_011681175
PCHDJPAE_57	33686	34989	eno	0.0	Streptococcal enolase	Exoenzyme	88.47	99.54	WP_000022832
PCHDJPAE_44	14381	15394	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	85.67	99.90	WP_002986042
PCHDJPAE_58	11255	12016	srtA	0.0	Sortase A	Exoenzyme	84.40	99.87	-
PCHDJPAE_55	79444	80490	rfbB	0.0	Capsule	Immune modulation	83.49	99.90	WP_002263087
PCHDJPAE_16	27490	28773	tig/ropA	0.0	Trigger factor	Stress survival	80.84	99.61	WP_000107753
PCHDJPAE_55	77712	78581	rfbA	0.0	Capsule	Immune modulation	80.28	99.77	WP_002904719
PCHDJPAE_26	3257	3927	STU_RS14635	1.17e-150	Capsule	Immune modulation	81.13	90.28	WP_011226046
PCHDJPAE_26	3257	3927	STER_RS05305	5.45e-149	Capsule	Immune modulation	80.98	90.28	WP_011681174
PCHDJPAE_26	3257	3927	STR_RS05250	5.53e-139	Capsule	Immune modulation	80.09	89.20	WP_011227246

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
PCHDJPAE_58	8566	7583	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	96.95	100.00	AAK75326
PCHDJPAE_58	20152	21225	MntE	0.0	manganese homeostasis	96.09	99.72	ABF32167
PCHDJPAE_44	147584	145278	pfl2(Sp_0459)	0.0	formate acetyltransferase	94.28	99.22	AAK74619
PCHDJPAE_22	88987	90468	SPD_0310	0.0	UPF0371 protein SPD_0310	93.12	100.00	ABJ54480
PCHDJPAE_58	39213	41459	metE	0.0	methionine biosynthesis enzymes	92.66	100.00	AAK74738
PCHDJPAE_7	30858	31826	spr0084	0.0	pathogenitcity related	92.57	98.48	AAK98888
PCHDJPAE_9	922	1893	prsA2	0.0	ribose-phosphate pyrophosphokinase	91.67	100.00	ABF36968
PCHDJPAE_55	52339	54069	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	90.12	100.00	AAK34199
PCHDJPAE_33	100029	98041	uvrB	0.0	excinuclease ABC, B subunit	89.44	100.00	AE014259_2
PCHDJPAE_5	30011	31162	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.32	99.74	AAL00050
PCHDJPAE_10	29766	28288	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.63	100.00	ADE32434
PCHDJPAE_57	33686	34987	Eno	0.0	enolase	86.44	99.77	ABP90468
PCHDJPAE_10	14420	12528	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	85.58	98.90	ABP91129
PCHDJPAE_58	44381	42672	PGM	0.0	phosphoglucomutase	84.76	99.65	ACH87041
PCHDJPAE_9	35360	36451	recA	0.0	DNA recombination and repair	84.64	95.36	AAL00560
PCHDJPAE_3	19783	20793	pdh	0.0	pyruvate dehydrogenase	83.38	99.70	ABP91006
PCHDJPAE_53	69044	70405	mnmE	0.0	central tRNA-modifying GTPase	82.67	99.56	ABP90420
PCHDJPAE_57	19278	20168	bglB	7.91e-178	putative phospho--glucosidase	87.20	99.66	AAK33487
PCHDJPAE_8	13534	12584	SP_0676	5.43e-171	transcription facot	81.39	98.45	AAK74821
PCHDJPAE_58	41649	42506	metF	3.09e-169	methionine biosynthesis enzymes	87.06	99.31	AAK74739
PCHDJPAE_13	1845	2549	covR	1.49e-127	responder protein	85.53	100.00	AAK71319
PCHDJPAE_22	22440	21769	rr01	3.66e-127	response regulator	84.82	99.56	CAB54566
PCHDJPAE_58	48351	49022	ciaR	6.84e-126	two component system response regulator	86.16	99.12	AIK75708
PCHDJPAE_58	48351	49019	CiaR	1.26e-125	two-component response regulator	87.44	99.55	AAK74935
PCHDJPAE_13	1845	2549	walR	3.38e-121	DNA-binding response regulator	82.13	100.00	ANC99504
PCHDJPAE_11	137762	138448	CovR	4.19e-120	serves to repress GAS virulence factor-encoding genes	81.66	100.00	ACE75886
PCHDJPAE_9	36624	37019	SpxA2	3.68e-76	transcriptional regulator	91.67	100.00	ERL21461
PCHDJPAE_53	57587	57186	SpxA1	8.14e-70	transcriptional regulator	82.09	100.00	ERL19273
PCHDJPAE_56	86021	85608	GrpE	6.48e-68	protein grpE	81.88	80.59	ABP89267
PCHDJPAE_11	160971	161258	spr0479	5.07e-48	essential gene	85.42	98.97	AAK99283
PCHDJPAE_17	20954	21208	spr1327	1.08e-44	essential gene	90.59	100.00	AAL00131
PCHDJPAE_15	1215	952	spr0175	1.60e-43	pathogenitcity related	85.23	100.00	AAK98979
PCHDJPAE_15	390	124	spr0177	3.56e-42	essential gene	83.15	88.12	AAK98981
PCHDJPAE_16	27323	26832	RopE (M5005_Spy_1611)	1.43e-73	probable DNA-directed RNA polymerase subunit delta	83.54	85.86	AAK34603
PCHDJPAE_44	147584	145284	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	82.97	98.08	MYN69560
PCHDJPAE_24	9484	10503	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	85.88	100.00	ABJ55451
PCHDJPAE_53	98046	97507	pnuC	1.67e-94	NAD salvage pathway importer	83.89	66.91	AAK75931