Genome ID：GCA_009717055.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
2	22	33	39.71

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
JEEIFBKO_6	308502	309719	mef(A)	Erythromycin, Azithromycin	100.00	100.00	U83667
JEEIFBKO_6	309839	311302	msr(D)	Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S	100.00	100.00	AF274302

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
JEEIFBKO_6	308502	309716	mef(A)	macrolide efflux MFS transporter Mef(A)	EXACTX	100.00	100.00	WP_000417519.1
JEEIFBKO_6	309839	311299	msr(D)	ABC-F type ribosomal protection protein Msr(D)	EXACTX	100.00	100.00	WP_000420313.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
JEEIFBKO_11	48546	50006	STU_RS14650	0.0	Capsule	Immune modulation	96.92	100.21	WP_011226049
JEEIFBKO_11	48546	50006	STER_RS05320	0.0	Capsule	Immune modulation	96.85	100.00	WP_011681177
JEEIFBKO_11	48546	50006	STR_RS05265	0.0	Capsule	Immune modulation	96.03	100.21	WP_041827043
JEEIFBKO_7	355259	356068	STU_RS16245	0.0	Capsule	Immune modulation	95.31	100.00	WP_002948020
JEEIFBKO_11	44941	46306	STER_RS05300	0.0	Capsule	Immune modulation	95.09	99.85	WP_011681173
JEEIFBKO_7	347270	348121	rfbD	0.0	Capsule	Immune modulation	95.07	100.00	WP_014621820
JEEIFBKO_11	46363	47103	STER_RS05305	0.0	Capsule	Immune modulation	94.87	100.00	WP_011681174
JEEIFBKO_11	44939	46306	STU_RS14630	0.0	Capsule	Immune modulation	94.59	100.00	WP_011226045
JEEIFBKO_11	46363	47103	STU_RS14635	0.0	Capsule	Immune modulation	94.33	100.00	WP_011226046
JEEIFBKO_9	2648	3931	tig/ropA	0.0	Trigger factor	Stress survival	94.08	100.00	WP_011225339
JEEIFBKO_11	46368	47103	STR_RS05250	0.0	Capsule	Immune modulation	93.89	98.13	WP_011227246
JEEIFBKO_11	47814	48545	STER_RS05315	0.0	Capsule	Immune modulation	93.85	100.00	WP_011681176
JEEIFBKO_11	47814	48545	STU_RS14645	0.0	Capsule	Immune modulation	93.72	100.00	WP_011226048
JEEIFBKO_7	349222	350493	STU_RS16265	0.0	Capsule	Immune modulation	93.71	99.76	WP_011226331
JEEIFBKO_7	356068	357273	STU_RS16240	0.0	Capsule	Immune modulation	93.53	100.00	WP_011226326
JEEIFBKO_11	47814	48545	STR_RS05260	0.0	Capsule	Immune modulation	93.17	100.00	WP_011227248
JEEIFBKO_7	358324	360108	STU_RS16230	0.0	Capsule	Immune modulation	92.94	100.00	WP_011226325
JEEIFBKO_7	353174	354322	STU_RS16255	0.0	Capsule	Immune modulation	92.17	100.00	WP_041828290
JEEIFBKO_6	464733	465326	STR_RS05880	0.0	Capsule	Immune modulation	91.92	100.00	WP_011226149
JEEIFBKO_6	464733	465326	STER_RS06030	0.0	Capsule	Immune modulation	91.75	100.00	WP_011226149
JEEIFBKO_6	464733	465326	STU_RS15260	0.0	Capsule	Immune modulation	91.75	100.00	WP_011226149
JEEIFBKO_7	357293	358327	STU_RS16235	0.0	Capsule	Immune modulation	91.39	99.05	WP_002948022
JEEIFBKO_7	354319	355275	STU_RS16250	0.0	Capsule	Immune modulation	91.33	100.00	WP_011226328
JEEIFBKO_6	463864	464733	rfbA	0.0	Capsule	Immune modulation	91.03	100.00	WP_011681286
JEEIFBKO_13	20838	21677	cbpD	0.0	Autolysin	Exoenzyme	90.95	100.00	WP_011226733
JEEIFBKO_8	365078	366736	fbp54	0.0	FBPs	Adherence	90.36	99.94	WP_011227179
JEEIFBKO_7	14388	15398	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	88.65	99.80	WP_002986042
JEEIFBKO_11	47113	47805	STR_RS05255	0.0	Capsule	Immune modulation	88.47	99.86	WP_011227247
JEEIFBKO_11	47113	47805	STU_RS14640	0.0	Capsule	Immune modulation	88.47	99.86	WP_011226047
JEEIFBKO_6	283015	284318	eno	0.0	Streptococcal enolase	Exoenzyme	88.47	99.54	WP_000022832
JEEIFBKO_11	47113	47805	STER_RS05310	0.0	Capsule	Immune modulation	88.18	99.86	WP_011681175
JEEIFBKO_8	209622	210383	srtA	0.0	Sortase A	Exoenzyme	84.03	99.74	-
JEEIFBKO_6	465529	466575	rfbB	0.0	Capsule	Immune modulation	80.42	100.00	WP_009659423

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
JEEIFBKO_8	206932	205958	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	96.92	99.09	AAK75326
JEEIFBKO_8	218513	219586	MntE	0.0	manganese homeostasis	95.25	99.72	ABF32167
JEEIFBKO_7	146384	144078	pfl2(Sp_0459)	0.0	formate acetyltransferase	94.41	99.22	AAK74619
JEEIFBKO_6	193218	194186	spr0084	0.0	pathogenitcity related	93.19	98.48	AAK98888
JEEIFBKO_8	51587	50106	SPD_0310	0.0	UPF0371 protein SPD_0310	93.12	100.00	ABJ54480
JEEIFBKO_8	246568	248814	metE	0.0	methionine biosynthesis enzymes	92.39	100.00	AAK74738
JEEIFBKO_13	36062	35091	prsA2	0.0	ribose-phosphate pyrophosphokinase	91.36	100.00	ABF36968
JEEIFBKO_7	296920	298068	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	90.08	99.48	AAL00050
JEEIFBKO_6	438479	440209	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	89.95	100.00	AAK34199
JEEIFBKO_7	333874	335862	uvrB	0.0	excinuclease ABC, B subunit	89.59	100.00	AE014259_2
JEEIFBKO_10	163557	162079	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.63	100.00	ADE32434
JEEIFBKO_6	283015	284316	Eno	0.0	enolase	86.44	99.77	ABP90468
JEEIFBKO_10	148234	146342	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	85.26	98.90	ABP91129
JEEIFBKO_8	251733	250024	PGM	0.0	phosphoglucomutase	84.76	99.65	ACH87041
JEEIFBKO_13	2168	1077	recA	0.0	DNA recombination and repair	84.64	95.36	AAL00560
JEEIFBKO_10	28765	29775	pdh	0.0	pyruvate dehydrogenase	82.79	99.70	ABP91006
JEEIFBKO_8	380257	378896	mnmE	0.0	central tRNA-modifying GTPase	82.46	99.56	ABP90420
JEEIFBKO_6	268605	269495	bglB	7.28e-178	putative phospho--glucosidase	87.88	99.66	AAK33487
JEEIFBKO_8	292592	291642	SP_0676	1.14e-169	transcription facot	81.39	98.45	AAK74821
JEEIFBKO_8	249001	249858	metF	9.36e-168	methionine biosynthesis enzymes	87.06	99.31	AAK74739
JEEIFBKO_2	426	1130	covR	3.46e-127	responder protein	85.11	100.00	AAK71319
JEEIFBKO_8	123702	124373	rr01	8.13e-127	response regulator	84.82	99.56	CAB54566
JEEIFBKO_8	255701	256372	ciaR	1.90e-124	two component system response regulator	85.71	99.12	AIK75708
JEEIFBKO_8	255701	256369	CiaR	2.36e-124	two-component response regulator	87.00	99.55	AAK74935
JEEIFBKO_2	426	1130	walR	6.35e-121	DNA-binding response regulator	81.70	100.00	ANC99504
JEEIFBKO_9	162188	162874	CovR	4.80e-120	serves to repress GAS virulence factor-encoding genes	81.66	100.00	ACE75886
JEEIFBKO_13	903	508	SpxA2	3.96e-76	transcriptional regulator	91.67	100.00	ERL21461
JEEIFBKO_8	391723	392124	SpxA1	4.71e-69	transcriptional regulator	82.09	100.00	ERL19273
JEEIFBKO_12	6355	5942	GrpE	9.69e-68	protein grpE	81.16	80.59	ABP89267
JEEIFBKO_9	185967	186254	spr0479	5.81e-48	essential gene	85.42	98.97	AAK99283
JEEIFBKO_6	156816	157070	spr1327	2.66e-44	essential gene	92.94	100.00	AAL00131
JEEIFBKO_10	117237	117500	spr0175	9.80e-43	pathogenitcity related	85.23	100.00	AAK98979
JEEIFBKO_10	118063	118329	spr0177	1.37e-41	essential gene	83.15	88.12	AAK98981
JEEIFBKO_9	4098	4589	RopE (M5005_Spy_1611)	1.06e-72	probable DNA-directed RNA polymerase subunit delta	82.93	85.86	AAK34603
JEEIFBKO_7	146384	144084	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	83.09	98.08	MYN69560
JEEIFBKO_10	65487	64468	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	96.77	100.00	ABJ55451