Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 1 | 4.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MCGGAMID_108 | 137730 | 138695 | CfxA2 | ARO:3003002 | CfxA2 | 100.00 | 100.00 | AF118110.1 |
| MCGGAMID_9 | 77018 | 78943 | tet(Q) | ARO:3000191 | tet(Q) | 89.08 | 97.56 | Z21523.1 |
| MCGGAMID_69 | 12973 | 13773 | ErmF | ARO:3000498 | ErmF | 98.50 | 100.00 | M17124.1 |
| MCGGAMID_53 | 7644 | 8381 | ErmB | ARO:3000375 | ErmB | 98.37 | 98.79 | AF242872.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MCGGAMID_108 | 137730 | 138695 | cfxA3 | Ampicillin | 99.90 | 100.00 | AF472622 |
| MCGGAMID_108 | 137730 | 138695 | cfxA4 | Unknown Beta-lactam | 99.90 | 100.00 | AY769933 |
| MCGGAMID_108 | 137730 | 138695 | cfxA5 | Unknown Beta-lactam | 99.90 | 100.00 | AY769934 |
| MCGGAMID_108 | 137730 | 138695 | cfxA | Cefoxitin, Ampicillin | 99.90 | 100.00 | U38243 |
| MCGGAMID_53 | 7644 | 8381 | erm(B) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.86 | 100.00 | U18931 |
| MCGGAMID_69 | 12973 | 13773 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.50 | 100.00 | M17808 |
| MCGGAMID_9 | 77018 | 78943 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 90.45 | 100.00 | L33696 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MCGGAMID_108 | 137733 | 138695 | cfxA | CfxA family broad-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_004339683.1 |
| MCGGAMID_53 | 7644 | 8378 | erm(B) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | BLASTX | 99.59 | 100.00 | WP_002292226.1 |
| MCGGAMID_69 | 12976 | 13773 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.87 | 100.00 | WP_002682030.1 |
| MCGGAMID_9 | 77018 | 78940 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 89.55 | 100.00 | WP_063856407.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MCGGAMID_53 | 107270 | 108850 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |