Genome ID:GCA_009738205.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1203136.91

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
GBDNCGFP_113949061395643ErmBARO:3000375ErmB99.1898.79AF242872.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
GBDNCGFP_113949061395643erm(B)Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S100.00100.00X72021

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
GBDNCGFP_113949091395643erm(B)23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)EXACTX100.00100.00WP_001038795.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
GBDNCGFP_111588231159554STER_RS053150.0CapsuleImmune modulation94.81100.00WP_011681176
GBDNCGFP_111588231159554STU_RS146450.0CapsuleImmune modulation94.54100.00WP_011226048
GBDNCGFP_1516226517077rfbD0.0CapsuleImmune modulation94.13100.00WP_014621820
GBDNCGFP_111588231159554STR_RS052600.0CapsuleImmune modulation94.13100.00WP_011227248
GBDNCGFP_1519339520148STU_RS162450.0CapsuleImmune modulation92.8599.88WP_002948020
GBDNCGFP_1522405524161STU_RS162300.0CapsuleImmune modulation92.6098.43WP_011226325
GBDNCGFP_1520148521353STU_RS162400.0CapsuleImmune modulation92.37100.00WP_011226326
GBDNCGFP_1518399519355STU_RS162500.0CapsuleImmune modulation91.85100.00WP_011226328
GBDNCGFP_1517254518402STU_RS162550.0CapsuleImmune modulation91.5799.83WP_041828290
GBDNCGFP_113107421311335STR_RS058800.0CapsuleImmune modulation91.08100.00WP_011226149
GBDNCGFP_110522421053900fbp540.0FBPsAdherence91.0899.94WP_011227179
GBDNCGFP_1521374522408STU_RS162350.0CapsuleImmune modulation91.0099.15WP_002948022
GBDNCGFP_111595551161015STER_RS053200.0CapsuleImmune modulation90.9299.86WP_011681177
GBDNCGFP_113107421311335STER_RS060300.0CapsuleImmune modulation90.91100.00WP_011226149
GBDNCGFP_113107421311335STU_RS152600.0CapsuleImmune modulation90.91100.00WP_011226149
GBDNCGFP_111595551161015STU_RS146500.0CapsuleImmune modulation90.78100.00WP_011226049
GBDNCGFP_111595551161015STR_RS052650.0CapsuleImmune modulation89.97100.00WP_041827043
GBDNCGFP_111581221158814STU_RS146400.0CapsuleImmune modulation89.90100.00WP_011226047
GBDNCGFP_111581221158814STR_RS052550.0CapsuleImmune modulation89.61100.00WP_011227247
GBDNCGFP_111581221158814STER_RS053100.0CapsuleImmune modulation89.47100.00WP_011681175
GBDNCGFP_115235261524829eno0.0Streptococcal enolaseExoenzyme88.2499.54WP_000022832
GBDNCGFP_1421304422143cbpD0.0AutolysinExoenzyme87.8799.88WP_011226733
GBDNCGFP_119813891982399plr/gapA0.0Streptococcal plasmin receptor/GAPDHAdherence86.2899.80WP_002986042
GBDNCGFP_1896423897184srtA0.0Sortase AExoenzyme83.8899.87-
GBDNCGFP_113094261310472rfbB0.0CapsuleImmune modulation83.4999.90WP_002263087
GBDNCGFP_1134775136058tig/ropA0.0Trigger factorStress survival80.5399.61WP_000107753
GBDNCGFP_113113351312204rfbA0.0CapsuleImmune modulation80.2899.77WP_002904719
GBDNCGFP_111574421158112STU_RS146351.29e-146CapsuleImmune modulation80.9890.28WP_011226046
GBDNCGFP_111574421158112STER_RS053056.02e-145CapsuleImmune modulation80.8390.28WP_011681174
GBDNCGFP_111575101158112STR_RS052506.11e-135CapsuleImmune modulation81.4680.13WP_011227246

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
GBDNCGFP_1893733892750ldh(Sp_1220)0.0L-lactate dehydrogenase96.95100.00AAK75326
GBDNCGFP_1905320906393MntE0.0manganese homeostasis96.0999.72ABF32167
GBDNCGFP_118438091846115pfl2(Sp_0459)0.0formate acetyltransferase94.4199.22AAK74619
GBDNCGFP_116216871620719spr00840.0pathogenitcity related93.1998.48AAK98888
GBDNCGFP_1925461927707metE0.0methionine biosynthesis enzymes92.92100.00AAK74738
GBDNCGFP_1761278759797SPD_03100.0UPF0371 protein SPD_031092.92100.00ABJ54480
GBDNCGFP_12433325304prsA20.0ribose-phosphate pyrophosphokinase91.67100.00ABF36968
GBDNCGFP_1839176845649PrtA0.0serine protease91.44100.61ABJ55268
GBDNCGFP_113375801335850ptsI0.0phosphoenolpyruvate-protein phosphotransferase89.95100.00AAK34199
GBDNCGFP_1502595504583uvrB0.0excinuclease ABC, B subunit89.74100.00AE014259_2
GBDNCGFP_116997551698604potA0.0ABC transporter ATP-binding protein-spermidine/putrescine transport89.5899.74AAL00050
GBDNCGFP_121820992180621IMPDH0.0inosine-5'-monophosphate dehydrogenase87.83100.00ADE32434
GBDNCGFP_115248291523528Eno0.0enolase86.4499.77ABP90468
GBDNCGFP_121667582164866gidA0.0tRNA uridine 5-carboxymethylaminomethyl modification enzyme85.7498.90ABP91129
GBDNCGFP_1930625928916PGM0.0phosphoglucomutase84.7699.65ACH87041
GBDNCGFP_15947560566recA0.0DNA recombination and repair84.6495.36AAL00560
GBDNCGFP_120330692034079pdh0.0pyruvate dehydrogenase83.3899.70ABP91006
GBDNCGFP_110678261066465mnmE0.0central tRNA-modifying GTPase82.8999.56ABP90420
GBDNCGFP_115407971539907bglB2.38e-176putative phospho--glucosidase87.2099.66AAK33487
GBDNCGFP_1970591969641SP_06763.24e-169transcription facot81.3998.45AAK74821
GBDNCGFP_1927897928754metF7.27e-169methionine biosynthesis enzymes87.7699.31AAK74739
GBDNCGFP_113744471375304mtsA6.28e-151substrate-binding lipoprotein of manganese transporter80.4992.86AIK76191
GBDNCGFP_1821199821870rr014.71e-126response regulator84.8299.56CAB54566
GBDNCGFP_111973551196651covR1.39e-125responder protein85.53100.00AAK71319
GBDNCGFP_1935291935962ciaR9.79e-124two component system response regulator85.7199.12AIK75708
GBDNCGFP_1935291935959CiaR1.22e-123two-component response regulator87.0099.55AAK74935
GBDNCGFP_1287589288275CovR1.84e-119serves to repress GAS virulence factor-encoding genes82.10100.00ACE75886
GBDNCGFP_111973551196651walR1.23e-118DNA-binding response regulator81.70100.00ANC99504
GBDNCGFP_16182762222SpxA22.16e-74transcriptional regulator91.67100.00ERL21461
GBDNCGFP_110818121082213SpxA11.40e-68transcriptional regulator82.09100.00ERL19273
GBDNCGFP_1113427113840GrpE1.81e-67protein grpE82.6180.59ABP89267
GBDNCGFP_1136225136716RopE (M5005_Spy_1611)1.06e-71probable DNA-directed RNA polymerase subunit delta82.9385.86AAK34603
GBDNCGFP_118438091846109PFL (B9H01_RS01125)0.0formate C-acetyltransferase83.2298.08MYN69560
GBDNCGFP_120702972069278ilvC (SPD_0406)0.0ketol-acid reductoisomerase (NADP(+))85.88100.00ABJ55451