Genome ID：GCA_009738225.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
4	16	30	34.23

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
ACNGBIMM_1	698252	698911	catQ	ARO:3002687	catQ	94.06	100.00	M55620.1
ACNGBIMM_2	121181	121675	lnuC	ARO:3002837	lnuC	98.17	100.00	AY928180.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
ACNGBIMM_1	693357	694574	mef(A)	Erythromycin, Azithromycin	100.00	100.00	U83667
ACNGBIMM_2	121181	121675	lnu(C)	Lincomycin	99.19	100.00	AY928180
ACNGBIMM_1	694694	696157	msr(D)	Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S	98.91	100.00	AF274302
ACNGBIMM_1	698252	698911	catQ	Chloramphenicol	96.21	100.00	M55620

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
ACNGBIMM_1	693357	694571	mef(A)	macrolide efflux MFS transporter Mef(A)	EXACTX	100.00	100.00	WP_000417519.1
ACNGBIMM_1	694694	696154	msr(D)	ABC-F type ribosomal protection protein Msr(D)	BLASTX	99.18	100.00	WP_000420313.1
ACNGBIMM_1	698252	698908	catA16	type A-16 chloramphenicol O-acetyltransferase CatQ	BLASTX	98.63	100.00	WP_063843221.1
ACNGBIMM_2	121184	121675	lnu(C)	lincosamide nucleotidyltransferase Lnu(C)	BLASTX	98.17	100.00	WP_063851341.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
ACNGBIMM_1	1029845	1031305	STU_RS14650	0.0	Capsule	Immune modulation	97.19	100.21	WP_011226049
ACNGBIMM_1	1029845	1031305	STER_RS05320	0.0	Capsule	Immune modulation	96.99	100.00	WP_011681177
ACNGBIMM_1	1029845	1031305	STR_RS05265	0.0	Capsule	Immune modulation	96.30	100.21	WP_041827043
ACNGBIMM_1	1033545	1034910	STER_RS05300	0.0	Capsule	Immune modulation	95.39	99.85	WP_011681173
ACNGBIMM_1	1033545	1034912	STU_RS14630	0.0	Capsule	Immune modulation	94.74	100.00	WP_011226045
ACNGBIMM_1	1032748	1033488	STER_RS05305	0.0	Capsule	Immune modulation	94.60	100.00	WP_011681174
ACNGBIMM_1	1032748	1033488	STU_RS14635	0.0	Capsule	Immune modulation	94.20	100.00	WP_011226046
ACNGBIMM_1	1031306	1032037	STER_RS05315	0.0	Capsule	Immune modulation	93.72	100.00	WP_011681176
ACNGBIMM_1	1712328	1713179	rfbD	0.0	Capsule	Immune modulation	93.66	100.00	WP_014621820
ACNGBIMM_1	1032748	1033483	STR_RS05250	0.0	Capsule	Immune modulation	93.61	98.13	WP_011227246
ACNGBIMM_1	1031306	1032037	STU_RS14645	0.0	Capsule	Immune modulation	93.58	100.00	WP_011226048
ACNGBIMM_1	1031306	1032037	STR_RS05260	0.0	Capsule	Immune modulation	92.90	100.00	WP_011227248
ACNGBIMM_1	854460	855053	STR_RS05880	0.0	Capsule	Immune modulation	91.92	100.00	WP_011226149
ACNGBIMM_1	854460	855053	STER_RS06030	0.0	Capsule	Immune modulation	91.75	100.00	WP_011226149
ACNGBIMM_1	854460	855053	STU_RS15260	0.0	Capsule	Immune modulation	91.75	100.00	WP_011226149
ACNGBIMM_1	853591	854460	rfbA	0.0	Capsule	Immune modulation	91.03	100.00	WP_011681286
ACNGBIMM_1	1147593	1149251	fbp54	0.0	FBPs	Adherence	90.24	99.94	WP_011227179
ACNGBIMM_1	2031697	2032707	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	88.65	99.80	WP_002986042
ACNGBIMM_1	1032046	1032738	STR_RS05255	0.0	Capsule	Immune modulation	88.47	99.86	WP_011227247
ACNGBIMM_1	1032046	1032738	STU_RS14640	0.0	Capsule	Immune modulation	88.47	99.86	WP_011226047
ACNGBIMM_1	666615	667918	eno	0.0	Streptococcal enolase	Exoenzyme	88.17	99.54	WP_000022832
ACNGBIMM_1	43081	43920	cbpD	0.0	Autolysin	Exoenzyme	87.75	99.88	WP_011226733
ACNGBIMM_1	1032046	1032738	STER_RS05310	0.0	Capsule	Immune modulation	87.61	99.86	WP_011681175
ACNGBIMM_1	855256	856302	rfbB	0.0	Capsule	Immune modulation	84.54	99.90	WP_002263087
ACNGBIMM_1	1292171	1292932	srtA	0.0	Sortase A	Exoenzyme	84.01	99.87	-
ACNGBIMM_1	158032	159315	tig/ropA	0.0	Trigger factor	Stress survival	80.76	99.61	WP_000107753
ACNGBIMM_1	1044067	1044650	SPD_RS01775	1.31e-156	Capsule	Immune modulation	84.10	96.20	WP_001819836

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
ACNGBIMM_1	1295620	1296594	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	96.00	99.09	AAK75326
ACNGBIMM_1	1280058	1278985	MntE	0.0	manganese homeostasis	95.53	99.72	ABF32167
ACNGBIMM_1	1900767	1903073	pfl2(Sp_0459)	0.0	formate acetyltransferase	94.41	99.22	AAK74619
ACNGBIMM_1	1430365	1431846	SPD_0310	0.0	UPF0371 protein SPD_0310	93.32	100.00	ABJ54480
ACNGBIMM_1	558737	559705	spr0084	0.0	pathogenitcity related	92.88	98.48	AAK98888
ACNGBIMM_1	1260497	1258251	metE	0.0	methionine biosynthesis enzymes	92.26	100.00	AAK74738
ACNGBIMM_1	24454	25425	prsA2	0.0	ribose-phosphate pyrophosphokinase	91.67	100.00	ABF36968
ACNGBIMM_1	828210	829940	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	89.95	100.00	AAK34199
ACNGBIMM_1	1726435	1724447	uvrB	0.0	excinuclease ABC, B subunit	89.59	100.00	AE014259_2
ACNGBIMM_1	1754668	1753517	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.32	99.74	AAL00050
ACNGBIMM_1	2243621	2242143	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.63	100.00	ADE32434
ACNGBIMM_1	666615	667916	Eno	0.0	enolase	86.44	99.77	ABP90468
ACNGBIMM_1	2227841	2225949	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	85.58	98.90	ABP91129
ACNGBIMM_1	64573	65664	recA	0.0	DNA recombination and repair	85.44	95.10	AAL00560
ACNGBIMM_1	1255329	1257038	PGM	0.0	phosphoglucomutase	84.76	99.65	ACH87041
ACNGBIMM_1	2086533	2087543	pdh	0.0	pyruvate dehydrogenase	83.09	99.70	ABP91006
ACNGBIMM_1	1120921	1122282	mnmE	0.0	central tRNA-modifying GTPase	82.02	99.56	ABP90420
ACNGBIMM_1	652206	653096	bglB	2.81e-177	putative phospho--glucosidase	87.88	99.66	AAK33487
ACNGBIMM_1	1214432	1215382	SP_0676	3.92e-169	transcription facot	81.39	98.45	AAK74821
ACNGBIMM_1	1258061	1257204	metF	8.23e-169	methionine biosynthesis enzymes	88.11	99.31	AAK74739
ACNGBIMM_1	1172237	1171452	pnuC	1.96e-148	NAD salvage pathway importer	86.26	97.40	AAK75931
ACNGBIMM_1	986801	987505	covR	1.01e-125	responder protein	85.53	100.00	AAK71319
ACNGBIMM_1	1364404	1363733	rr01	1.62e-124	response regulator	83.93	99.56	CAB54566
ACNGBIMM_1	1251362	1250691	ciaR	1.01e-123	two component system response regulator	85.71	99.12	AIK75708
ACNGBIMM_1	1251362	1250694	CiaR	1.25e-123	two-component response regulator	87.00	99.55	AAK74935
ACNGBIMM_1	986801	987505	walR	2.29e-119	DNA-binding response regulator	82.13	100.00	ANC99504
ACNGBIMM_1	306927	307613	CovR	4.93e-119	serves to repress GAS virulence factor-encoding genes	81.66	100.00	ACE75886
ACNGBIMM_1	65840	66235	SpxA2	2.22e-74	transcriptional regulator	91.67	100.00	ERL21461
ACNGBIMM_1	1109455	1109054	SpxA1	4.62e-69	transcriptional regulator	82.84	100.00	ERL19273
ACNGBIMM_1	144723	145136	GrpE	4.15e-66	protein grpE	81.16	80.59	ABP89267
ACNGBIMM_1	159482	159973	RopE (M5005_Spy_1611)	1.09e-71	probable DNA-directed RNA polymerase subunit delta	82.93	85.86	AAK34603
ACNGBIMM_1	1900767	1903067	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	83.09	98.08	MYN69560
ACNGBIMM_1	2122997	2121978	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	97.65	100.00	ABJ55451