Genome ID:GCA_009834865.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 11 | 10 | 9 | 17.38 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BEJHNKKA_84 | 100413 | 101582 | bmr | ARO:3003007 | bmr | 99.49 | 100.00 | M33768.1 |
| BEJHNKKA_139 | 63921 | 64841 | mphK | ARO:3004541 | mphK | 96.73 | 100.00 | CP010314.1 |
| BEJHNKKA_139 | 50590 | 52029 | lmrB | ARO:3002813 | lmrB | 99.58 | 100.42 | JYFL01000006.1 |
| BEJHNKKA_67 | 36700 | 37554 | aadK | ARO:3002627 | aadK | 99.30 | 100.00 | AL009126.1 |
| BEJHNKKA_150 | 27382 | 29952 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.65 | 100.00 | AL009126.3 |
| BEJHNKKA_11 | 23486 | 23824 | ykkC | ARO:3003063 | ykkC | 98.21 | 100.00 | AL009126.1 |
| BEJHNKKA_11 | 23169 | 23486 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| BEJHNKKA_22 | 19950 | 21587 | vmlR | ARO:3004476 | vmlR | 98.72 | 99.63 | NC_000964.3 |
| BEJHNKKA_67 | 7411 | 8613 | blt | ARO:3003006 | blt | 99.25 | 100.00 | L32599.1 |
| BEJHNKKA_139 | 901 | 1494 | tmrB | ARO:3003059 | tmrB | 97.97 | 100.00 | AL009126.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BEJHNKKA_67 | 36700 | 37554 | aadK | Streptomycin | 99.18 | 100.00 | M26879 |
| BEJHNKKA_139 | 63921 | 64841 | mph(K) | Spiramycin, Telithromycin | 96.96 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BEJHNKKA_67 | 36703 | 37554 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 99.30 | 100.00 | WP_003229862.1 |
| BEJHNKKA_22 | 19950 | 21590 | vmlR | ABC-F type ribosomal protection protein VmlR | INTERNAL_STOP | 98.54 | 99.82 | WP_003234144.1 |
| BEJHNKKA_139 | 63924 | 64841 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 96.73 | 100.00 | WP_003246254.1 |
| BEJHNKKA_120 | 8778 | 11375 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.83 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| BEJHNKKA_33 | 57829 | 58614 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.75 | 100.00 | NP_391080 |
| BEJHNKKA_81 | 31004 | 31453 | capC | 0.0 | Capsule | Immune modulation | 99.56 | 100.00 | NP_391470 |
| BEJHNKKA_6 | 4644 | 5285 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.53 | 100.00 | NP_390062 |
| BEJHNKKA_81 | 31468 | 32649 | capB | 0.0 | Capsule | Immune modulation | 99.49 | 100.00 | NP_391471 |
| BEJHNKKA_81 | 29843 | 30985 | capA | 0.0 | Capsule | Immune modulation | 99.21 | 100.00 | NP_391469 |
| BEJHNKKA_33 | 56607 | 57803 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.91 | 100.00 | NP_391079 |
| BEJHNKKA_123 | 3695 | 5458 | dep/capD | 0.0 | Capsule | Immune modulation | 98.70 | 100.00 | NP_389723 |
| BEJHNKKA_33 | 46837 | 53973 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.64 | 100.00 | NP_391076 |
| BEJHNKKA_33 | 54959 | 56578 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.46 | 100.00 | NP_391078 |
| BEJHNKKA_33 | 53993 | 54931 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.30 | 100.00 | NP_391077 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BEJHNKKA_86 | 28071 | 26935 | tufA | 0.0 | elongation factor Tu | 85.75 | 95.69 | AHM69299 |
| BEJHNKKA_119 | 4328 | 5197 | pdxS | 1.11e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| BEJHNKKA_95 | 70638 | 71414 | CodY | 9.68e-126 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| BEJHNKKA_117 | 1031 | 462 | ClpP | 7.04e-100 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| BEJHNKKA_15 | 3333 | 2941 | spxA1 | 1.55e-72 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| BEJHNKKA_15 | 3333 | 2941 | spx | 9.91e-71 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| BEJHNKKA_91 | 8146 | 7904 | SpoVG | 3.90e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| BEJHNKKA_22 | 75408 | 75211 | CspA | 3.78e-32 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| BEJHNKKA_88 | 23955 | 23761 | CspD | 1.93e-29 | cold shock protein | 81.54 | 98.48 | CAC99957 |
| BEJHNKKA_68 | 38731 | 38925 | CspB | 4.46e-28 | cold shock protein | 83.08 | 98.48 | CAD00094 |