Genome ID:GCA_009857115.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310416.88

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
LACGBPMO_139010713902240bmrARO:3003007bmr99.74100.00M33768.1
LACGBPMO_128744442874761ykkDARO:3003064ykkD99.05100.00AL009126.1
LACGBPMO_128741062874444ykkCARO:3003063ykkC100.00100.00AL009126.1
LACGBPMO_124124182414988Bacillus subtilis mprFARO:3003324Bsub_mprF100.00100.00AL009126.3
LACGBPMO_120980462099689vmlRARO:3004476vmlR100.00100.00NC_000964.3
LACGBPMO_118526081853201tmrBARO:3003059tmrB98.48100.00AL009126.3
LACGBPMO_118020791803512lmrBARO:3002813lmrB99.37100.00JYFL01000006.1
LACGBPMO_117892641790184mphKARO:3004541mphK97.71100.00CP010314.1
LACGBPMO_13431335167aadKARO:3002627aadK100.00100.00AL009126.1
LACGBPMO_11560816810bltARO:3003006blt100.00100.00L32599.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
LACGBPMO_13431335167aadKStreptomycin100.00100.00M26879
LACGBPMO_114854761486852tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline99.93100.00X08034
LACGBPMO_117892641790184mph(K)Spiramycin, Telithromycin97.72100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
LACGBPMO_13431635167aadKaminoglycoside 6-adenylyltransferase AadKEXACTX100.00100.00WP_003229862.1
LACGBPMO_114854791486852tet(L)tetracycline efflux MFS transporter Tet(L)EXACTX100.00100.00WP_003242953.1
LACGBPMO_120980492099689vmlRABC-F type ribosomal protection protein VmlREXACTX100.00100.00WP_003234144.1
LACGBPMO_117892641790181mphKmacrolide 2'-phosphotransferase MphKBLASTX97.71100.00WP_003246254.1
LACGBPMO_114830051483523satAstreptothricin N-acetyltransferase SatABLASTX90.17100.00WP_003242546.1
LACGBPMO_135921453594739rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.1599.88WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
LACGBPMO_135454883547251dep/capD0.0CapsuleImmune modulation100.00100.00NP_389723
LACGBPMO_1590123590908dhbA0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391080
LACGBPMO_137016943702335hlyIII0.0Hemolysin IIIExotoxin100.00100.00NP_390062
LACGBPMO_1586287587225dhbB0.0BacillibactinNutritional/Metabolic factor99.89100.00NP_391077
LACGBPMO_1588901590097dhbC0.0BacillibactinNutritional/Metabolic factor99.67100.00NP_391079
LACGBPMO_1997992999173capB0.0CapsuleImmune modulation99.66100.00NP_391471
LACGBPMO_1579131586267dhbF0.0BacillibactinNutritional/Metabolic factor99.58100.00NP_391076
LACGBPMO_1587253588872dhbE0.0BacillibactinNutritional/Metabolic factor99.57100.00NP_391078
LACGBPMO_1996367997509capA0.0CapsuleImmune modulation98.95100.00NP_391469
LACGBPMO_1997528997977capC0.0CapsuleImmune modulation98.67100.00NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
LACGBPMO_116462901647426tufA0.0elongation factor Tu84.9695.69AHM69299
LACGBPMO_115324781533347pdxS3.06e-149encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
LACGBPMO_131877383188514CodY3.34e-124nutrient-responsive regulator81.08100.00ACJ80679
LACGBPMO_1844844845413ClpP2.48e-98part of proteolytic complex81.0597.44BAB94595