Genome ID:GCA_009863735.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
2022.83

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
JDOHPBJL_1680029378tet(L)ARO:3000179tet(L)98.25100.00M11036.1
JDOHPBJL_1658837808tet(M)ARO:3000186tet(M)98.60100.31AB039845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
JDOHPBJL_1680039378tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline99.4999.93AY081910
JDOHPBJL_1658837808tet(M)Doxycycline, Tetracycline, Minocycline99.43100.00X75073

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
JDOHPBJL_1658837805tet(M)tetracycline resistance ribosomal protection protein Tet(M)BLASTX99.22100.00WP_000691727.1
JDOHPBJL_1680029375tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX98.69100.00WP_002294500.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
JDOHPBJL_25482255529WalR2.07e-116transcriptional regulatory protein85.59100.43EPH95667
JDOHPBJL_12104704104901CspR3.00e-28cold shock protein81.82100.00AAO82613
JDOHPBJL_12104704104898CspA1.47e-27cold shock protein81.5498.48CAA62903