Genome ID:GCA_009866025.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
3023.61

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
ABCHNEKO_111370614191lnuAARO:3002835lnuA97.52100.00M14039.1
ABCHNEKO_111028611662tet(L)ARO:3000179tet(L)98.03100.00M11036.1
ABCHNEKO_11816710092tet(M)ARO:3000186tet(M)95.79100.31AB039845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
ABCHNEKO_111028711662tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline99.4299.93AY081910
ABCHNEKO_111370614191lnu(A)Lincomycin98.77100.00M14039
ABCHNEKO_11816710092tet(M)Doxycycline, Tetracycline, Minocycline96.68100.00X75073

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
ABCHNEKO_111370914191lnu(A)lincosamide nucleotidyltransferase Lnu(A)EXACTX100.00100.00WP_001829870.1
ABCHNEKO_111028611659tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX98.47100.00WP_002294500.1
ABCHNEKO_11816710089tet(M)tetracycline resistance ribosomal protection protein Tet(M)BLASTX96.57100.00WP_063856113.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
ABCHNEKO_25886359570WalR2.21e-116transcriptional regulatory protein85.59100.43EPH95667
ABCHNEKO_353962139818CspR1.68e-28cold shock protein81.82100.00AAO82613
ABCHNEKO_353962139815CspA2.91e-27cold shock protein80.0098.48CAA62903