Genome ID:GCA_009866865.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 10 | 3 | 15.91 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DNGPGFBA_1 | 2664280 | 2665482 | blt | ARO:3003006 | blt | 99.25 | 100.00 | L32599.1 |
| DNGPGFBA_1 | 2491023 | 2492192 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| DNGPGFBA_1 | 1424682 | 1424999 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| DNGPGFBA_1 | 1424344 | 1424682 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| DNGPGFBA_1 | 963394 | 965964 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.65 | 100.00 | AL009126.3 |
| DNGPGFBA_1 | 642585 | 644231 | vmlR | ARO:3004476 | vmlR | 98.91 | 100.18 | NC_000964.3 |
| DNGPGFBA_1 | 372083 | 372676 | tmrB | ARO:3003059 | tmrB | 99.49 | 100.00 | AL009126.3 |
| DNGPGFBA_1 | 321587 | 323020 | lmrB | ARO:3002813 | lmrB | 99.58 | 100.00 | JYFL01000006.1 |
| DNGPGFBA_1 | 308774 | 309694 | mphK | ARO:3004541 | mphK | 99.67 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DNGPGFBA_1 | 308774 | 309694 | mph(K) | Spiramycin, Telithromycin | 99.57 | 100.00 | NC_000964 |
| DNGPGFBA_1 | 4178562 | 4179938 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 98.84 | 100.00 | D12567 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DNGPGFBA_1 | 308774 | 309691 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 99.67 | 100.00 | WP_003246254.1 |
| DNGPGFBA_1 | 4178565 | 4179938 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 98.91 | 100.00 | WP_063856081.1 |
| DNGPGFBA_1 | 642588 | 644231 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.91 | 100.00 | WP_003234144.1 |
| DNGPGFBA_1 | 4176076 | 4176594 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 93.06 | 100.00 | WP_003242546.1 |
| DNGPGFBA_1 | 2008415 | 2011003 | rphC | rifamycin-inactivating phosphotransferase RphC | INTERNAL_STOP | 80.25 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| DNGPGFBA_1 | 3259418 | 3260203 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.75 | 100.00 | NP_391080 |
| DNGPGFBA_1 | 3686588 | 3687037 | capC | 0.0 | Capsule | Immune modulation | 99.56 | 100.00 | NP_391470 |
| DNGPGFBA_1 | 3687052 | 3688233 | capB | 0.0 | Capsule | Immune modulation | 99.49 | 100.00 | NP_391471 |
| DNGPGFBA_1 | 2252450 | 2253091 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.38 | 100.00 | NP_390062 |
| DNGPGFBA_1 | 3685427 | 3686569 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| DNGPGFBA_1 | 3255582 | 3256520 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.25 | 100.00 | NP_391077 |
| DNGPGFBA_1 | 1962659 | 1964422 | dep/capD | 0.0 | Capsule | Immune modulation | 98.98 | 100.00 | NP_389723 |
| DNGPGFBA_1 | 3248426 | 3255562 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.70 | 100.00 | NP_391076 |
| DNGPGFBA_1 | 3258196 | 3259392 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.58 | 100.00 | NP_391079 |
| DNGPGFBA_1 | 3256548 | 3258167 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.53 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DNGPGFBA_1 | 133494 | 134630 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| DNGPGFBA_1 | 1733444 | 1734220 | CodY | 3.41e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| DNGPGFBA_1 | 3534637 | 3535206 | ClpP | 2.53e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |