Genome ID:GCA_009913275.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 10 | 4 | 16.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ABCHOCKG_1 | 2732401 | 2733321 | mphK | ARO:3004541 | mphK | 98.37 | 100.00 | CP010314.1 |
| ABCHOCKG_1 | 2719075 | 2720508 | lmrB | ARO:3002813 | lmrB | 100.00 | 100.00 | JYFL01000006.1 |
| ABCHOCKG_1 | 2669353 | 2669946 | tmrB | ARO:3003059 | tmrB | 97.97 | 100.00 | AL009126.3 |
| ABCHOCKG_1 | 2416407 | 2418050 | vmlR | ARO:3004476 | vmlR | 96.71 | 100.00 | NC_000964.3 |
| ABCHOCKG_1 | 2095558 | 2098128 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
| ABCHOCKG_1 | 1630353 | 1630691 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| ABCHOCKG_1 | 1630036 | 1630353 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| ABCHOCKG_1 | 488731 | 489900 | bmr | ARO:3003007 | bmr | 99.23 | 100.00 | M33768.1 |
| ABCHOCKG_1 | 230404 | 231606 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
| ABCHOCKG_1 | 213481 | 214335 | aadK | ARO:3002627 | aadK | 98.94 | 100.00 | AL009126.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ABCHOCKG_1 | 213481 | 214333 | aadK | Streptomycin | 98.83 | 99.77 | M26879 |
| ABCHOCKG_1 | 2732401 | 2733321 | mph(K) | Spiramycin, Telithromycin | 98.15 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ABCHOCKG_1 | 213481 | 214332 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.94 | 100.00 | WP_003229862.1 |
| ABCHOCKG_1 | 2732404 | 2733321 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.37 | 100.00 | WP_003246254.1 |
| ABCHOCKG_1 | 2416407 | 2418047 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 96.71 | 100.00 | WP_003234144.1 |
| ABCHOCKG_1 | 3032856 | 3033374 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.75 | 100.00 | WP_003242546.1 |
| ABCHOCKG_1 | 910445 | 913042 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.83 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| ABCHOCKG_1 | 3923383 | 3924168 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.87 | 100.00 | NP_391080 |
| ABCHOCKG_1 | 3507664 | 3508845 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| ABCHOCKG_1 | 3927066 | 3928004 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.25 | 100.00 | NP_391077 |
| ABCHOCKG_1 | 3509328 | 3510470 | capA | 0.0 | Capsule | Immune modulation | 99.12 | 100.00 | NP_391469 |
| ABCHOCKG_1 | 3508860 | 3509309 | capC | 0.0 | Capsule | Immune modulation | 99.11 | 100.00 | NP_391470 |
| ABCHOCKG_1 | 3924194 | 3925390 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.08 | 100.00 | NP_391079 |
| ABCHOCKG_1 | 960683 | 962446 | dep/capD | 0.0 | Capsule | Immune modulation | 99.04 | 100.00 | NP_389723 |
| ABCHOCKG_1 | 686577 | 687218 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 98.91 | 100.00 | NP_390062 |
| ABCHOCKG_1 | 3928024 | 3935160 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.47 | 100.00 | NP_391076 |
| ABCHOCKG_1 | 3925419 | 3927038 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.35 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ABCHOCKG_1 | 2866370 | 2865234 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| ABCHOCKG_1 | 2980108 | 2979239 | pdxS | 1.23e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| ABCHOCKG_1 | 1318495 | 1317719 | CodY | 3.47e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| ABCHOCKG_1 | 3671551 | 3670982 | ClpP | 2.58e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |