Genome ID:GCA_009913515.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 4 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OFJPNBIK_1 | 2454703 | 2455623 | mphK | ARO:3004541 | mphK | 100.00 | 100.00 | CP010314.1 |
| OFJPNBIK_1 | 2441377 | 2442810 | lmrB | ARO:3002813 | lmrB | 100.00 | 100.00 | JYFL01000006.1 |
| OFJPNBIK_1 | 2391696 | 2392289 | tmrB | ARO:3003059 | tmrB | 98.48 | 100.00 | AL009126.3 |
| OFJPNBIK_1 | 2148676 | 2150319 | vmlR | ARO:3004476 | vmlR | 98.35 | 100.00 | NC_000964.3 |
| OFJPNBIK_1 | 1849458 | 1852028 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 100.00 | 100.00 | AL009126.3 |
| OFJPNBIK_1 | 1389983 | 1390321 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| OFJPNBIK_1 | 1389666 | 1389983 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| OFJPNBIK_1 | 277211 | 278380 | bmr | ARO:3003007 | bmr | 99.49 | 100.00 | M33768.1 |
| OFJPNBIK_1 | 54896 | 56098 | blt | ARO:3003006 | blt | 99.50 | 100.00 | L32599.1 |
| OFJPNBIK_1 | 36511 | 37365 | aadK | ARO:3002627 | aadK | 97.89 | 100.00 | AL009126.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OFJPNBIK_1 | 2454703 | 2455623 | mph(K) | Spiramycin, Telithromycin | 99.89 | 100.00 | NC_000964 |
| OFJPNBIK_1 | 2755926 | 2757302 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 99.06 | 100.00 | D12567 |
| OFJPNBIK_1 | 36511 | 37363 | aadK | Streptomycin | 98.59 | 99.77 | M26879 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OFJPNBIK_1 | 2454706 | 2455623 | mphK | macrolide 2'-phosphotransferase MphK | EXACTX | 100.00 | 100.00 | WP_003246254.1 |
| OFJPNBIK_1 | 2755926 | 2757299 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 98.91 | 100.00 | WP_063856081.1 |
| OFJPNBIK_1 | 2148676 | 2150316 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.35 | 100.00 | WP_003234144.1 |
| OFJPNBIK_1 | 36511 | 37362 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 97.89 | 100.00 | WP_003229862.1 |
| OFJPNBIK_1 | 2759336 | 2759854 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.17 | 100.00 | WP_003242546.1 |
| OFJPNBIK_1 | 714060 | 716654 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.15 | 99.88 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| OFJPNBIK_1 | 3686274 | 3687212 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.68 | 100.00 | NP_391077 |
| OFJPNBIK_1 | 3236594 | 3237775 | capB | 0.0 | Capsule | Immune modulation | 99.58 | 100.00 | NP_391471 |
| OFJPNBIK_1 | 3682591 | 3683376 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| OFJPNBIK_1 | 3238258 | 3239400 | capA | 0.0 | Capsule | Immune modulation | 99.47 | 100.00 | NP_391469 |
| OFJPNBIK_1 | 477106 | 477747 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.38 | 100.00 | NP_390062 |
| OFJPNBIK_1 | 3237790 | 3238239 | capC | 0.0 | Capsule | Immune modulation | 99.11 | 100.00 | NP_391470 |
| OFJPNBIK_1 | 760316 | 762079 | dep/capD | 0.0 | Capsule | Immune modulation | 99.04 | 100.00 | NP_389723 |
| OFJPNBIK_1 | 3683402 | 3684598 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.00 | 100.00 | NP_391079 |
| OFJPNBIK_1 | 3687232 | 3694368 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.98 | 100.00 | NP_391076 |
| OFJPNBIK_1 | 3684627 | 3686246 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.89 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OFJPNBIK_1 | 2593553 | 2592417 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| OFJPNBIK_1 | 2707360 | 2706491 | pdxS | 3.13e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| OFJPNBIK_1 | 1076640 | 1075864 | CodY | 3.42e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| OFJPNBIK_1 | 3390997 | 3390428 | ClpP | 2.53e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |