Genome ID:GCA_009996815.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310918.71

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
FGNAGLGP_56520658521827bmrARO:3003007bmr99.74100.00M33768.1
FGNAGLGP_57410049411695vmlRARO:3004476vmlR99.45100.18NC_000964.3
FGNAGLGP_34258746261316Bacillus subtilis mprFARO:3003324Bsub_mprF99.77100.00AL009126.3
FGNAGLGP_2178990179328ykkCARO:3003063ykkC100.00100.00AL009126.1
FGNAGLGP_2178673178990ykkDARO:3003064ykkD99.05100.00AL009126.1
FGNAGLGP_57153497154090tmrBARO:3003059tmrB97.97100.00AL009126.3
FGNAGLGP_57102943104382lmrBARO:3002813lmrB98.95100.42JYFL01000006.1
FGNAGLGP_579013391053mphKARO:3004541mphK99.01100.00CP010314.1
FGNAGLGP_593225333107aadKARO:3002627aadK97.54100.00AL009126.1
FGNAGLGP_591562116823bltARO:3003006blt99.25100.00L32599.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
FGNAGLGP_579013391053mph(K)Spiramycin, Telithromycin99.02100.00NC_000964
FGNAGLGP_12521290522666tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline98.98100.00D12567
FGNAGLGP_593225333107aadKStreptomycin98.25100.00M26879

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
FGNAGLGP_57410052411695vmlRABC-F type ribosomal protection protein VmlRBLASTX99.45100.00WP_003234144.1
FGNAGLGP_12521293522666tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX99.13100.00WP_063856081.1
FGNAGLGP_579013391041mphKmacrolide 2'-phosphotransferase MphKBLASTX99.0199.02WP_003246254.1
FGNAGLGP_593225633107aadKaminoglycoside 6-adenylyltransferase AadKBLASTX97.54100.00WP_003229862.1
FGNAGLGP_12518804519322satAstreptothricin N-acetyltransferase SatABLASTX93.06100.00WP_003242546.1
FGNAGLGP_565866561262rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.65100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
FGNAGLGP_123242833609capB0.0CapsuleImmune modulation99.75100.00NP_391471
FGNAGLGP_23386432387217dhbA0.0BacillibactinNutritional/Metabolic factor99.75100.00NP_391080
FGNAGLGP_56323345323986hlyIII0.0Hemolysin IIIExotoxin99.69100.00NP_390062
FGNAGLGP_5682209983dep/capD0.0CapsuleImmune modulation99.26100.00NP_389723
FGNAGLGP_23390115391053dhbB0.0BacillibactinNutritional/Metabolic factor99.25100.00NP_391077
FGNAGLGP_123080331945capA0.0CapsuleImmune modulation99.12100.00NP_391469
FGNAGLGP_123196432413capC0.0CapsuleImmune modulation98.89100.00NP_391470
FGNAGLGP_23391073398209dhbF0.0BacillibactinNutritional/Metabolic factor98.66100.00NP_391076
FGNAGLGP_23387243388439dhbC0.0BacillibactinNutritional/Metabolic factor98.50100.00NP_391079
FGNAGLGP_23388468390087dhbE0.0BacillibactinNutritional/Metabolic factor97.10100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
FGNAGLGP_203511364Xoo36540.0negative regulator of Xoo virulence98.2284.92AAW76908
FGNAGLGP_73190233038tufA0.0elongation factor Tu84.9695.69AHM69299
FGNAGLGP_143735242pdxS1.11e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
FGNAGLGP_58132668133444CodY3.45e-125nutrient-responsive regulator81.08100.00ACJ80679
FGNAGLGP_23124119123550ClpP3.01e-99part of proteolytic complex81.0597.44BAB94595
FGNAGLGP_2327263326871spxA13.91e-70redox-responsive transcription factor83.97100.00AAF21893
FGNAGLGP_2327263326871spx2.33e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
FGNAGLGP_32092321165SpoVG7.55e-39RNA-binding protein81.4879.41AAT02994
FGNAGLGP_57360609360806CspA1.90e-31cold shock protein90.91100.00CAA62903
FGNAGLGP_56335216335410CspD1.74e-27cold shock protein80.0098.48CAC99957
FGNAGLGP_56335216335413CspB3.61e-27cold shock protein80.30100.00CAD00094