Genome ID:GCA_011754125.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 2 | 7 | 7.35 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BCKPOJNH_10 | 410275 | 411651 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 87.07 | 100.00 | X08034 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BCKPOJNH_10 | 410275 | 411645 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 86.87 | 99.78 | WP_003242953.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| BCKPOJNH_9 | 545406 | 546587 | capB | 0.0 | Capsule | Immune modulation | 82.63 | 99.66 | NP_391471 |
| BCKPOJNH_9 | 544942 | 545391 | capC | 8.37e-116 | Capsule | Immune modulation | 83.81 | 99.78 | NP_391470 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BCKPOJNH_6 | 31778 | 32914 | tufA | 0.0 | elongation factor Tu | 86.54 | 95.69 | AHM69299 |
| BCKPOJNH_4 | 7451 | 8320 | pdxS | 1.09e-152 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 84.83 | 98.31 | ACE61268 |
| BCKPOJNH_11 | 413899 | 413123 | CodY | 7.99e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| BCKPOJNH_5 | 200938 | 201330 | spxA1 | 1.12e-69 | redox-responsive transcription factor | 83.21 | 100.00 | AAF21893 |
| BCKPOJNH_1 | 70561 | 70364 | CspA | 2.31e-31 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| BCKPOJNH_7 | 15311 | 15505 | CspB | 1.17e-27 | cold shock protein | 84.61 | 98.48 | CAD00094 |
| BCKPOJNH_1 | 70561 | 70367 | CspR | 3.02e-26 | cold shock protein | 80.00 | 98.48 | AAO82613 |
| BCKPOJNH_9 | 143417 | 142545 | lipA (SAUSA300_0829) | 3.38e-162 | lipoic acid synthetase | 80.82 | 95.41 | ABD22039 |