Genome ID:GCA_012028945.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1210817.55

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
OPMHJOBB_32648929650098bmrARO:3003007bmr99.74100.00M33768.1
OPMHJOBB_16591897592235ykkCARO:3003063ykkC100.00100.00AL009126.1
OPMHJOBB_16591580591897ykkDARO:3003064ykkD99.05100.00AL009126.1
OPMHJOBB_32475632476834bltARO:3003006blt99.00100.00L32599.1
OPMHJOBB_32458835459689aadKARO:3002627aadK97.89100.00AL009126.1
OPMHJOBB_42263917266487Bacillus subtilis mprFARO:3003324Bsub_mprF99.88100.00AL009126.3
OPMHJOBB_52136473137066tmrBARO:3003059tmrB97.46100.00AL009126.3
OPMHJOBB_589213193777vmlRARO:3004476vmlR98.91100.18NC_000964.3
OPMHJOBB_528597587414lmrBARO:3002813lmrB99.37100.42JYFL01000006.1
OPMHJOBB_527316074080mphKARO:3004541mphK98.37100.00CP010314.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
OPMHJOBB_527316074080mph(K)Spiramycin, Telithromycin99.02100.00NC_000964
OPMHJOBB_32458835459689aadKStreptomycin98.48100.00M26879

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
OPMHJOBB_589213493777vmlRABC-F type ribosomal protection protein VmlRBLASTX98.91100.00WP_003234144.1
OPMHJOBB_527316074077mphKmacrolide 2'-phosphotransferase MphKBLASTX98.37100.00WP_003246254.1
OPMHJOBB_32458835459686aadKaminoglycoside 6-adenylyltransferase AadKBLASTX97.89100.00WP_003229862.1
OPMHJOBB_233812938647satAstreptothricin N-acetyltransferase SatABLASTX91.91100.00WP_003242546.1
OPMHJOBB_32942411945008rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.60100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
OPMHJOBB_32846774847415hlyIII0.0Hemolysin IIIExotoxin99.84100.00NP_390062
OPMHJOBB_23523530524711capB0.0CapsuleImmune modulation99.66100.00NP_391471
OPMHJOBB_23954761955546dhbA0.0BacillibactinNutritional/Metabolic factor99.49100.00NP_391080
OPMHJOBB_23955572956768dhbC0.0BacillibactinNutritional/Metabolic factor99.33100.00NP_391079
OPMHJOBB_23958444959382dhbB0.0BacillibactinNutritional/Metabolic factor99.15100.00NP_391077
OPMHJOBB_23525194526336capA0.0CapsuleImmune modulation99.04100.00NP_391469
OPMHJOBB_32997463999226dep/capD0.0CapsuleImmune modulation98.98100.00NP_389723
OPMHJOBB_23524726525175capC0.0CapsuleImmune modulation98.89100.00NP_391470
OPMHJOBB_23959402966538dhbF0.0BacillibactinNutritional/Metabolic factor98.54100.00NP_391076
OPMHJOBB_23956797958416dhbE0.0BacillibactinNutritional/Metabolic factor96.61100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
OPMHJOBB_552802526889tufA0.0elongation factor Tu84.9695.69AHM69299
OPMHJOBB_2543745243pdxS1.11e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
OPMHJOBB_16280544279768CodY5.14e-125nutrient-responsive regulator81.08100.00ACJ80679
OPMHJOBB_23682751682182ClpP6.42e-99part of proteolytic complex81.0597.44BAB94595
OPMHJOBB_47275728276120spxA12.72e-70redox-responsive transcription factor83.97100.00AAF21893
OPMHJOBB_47275728276120spx1.62e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
OPMHJOBB_662058920831SpoVG7.51e-39RNA-binding protein81.4879.41AAT02994
OPMHJOBB_584489745094CspA5.30e-32cold shock protein90.91100.00CAA62903
OPMHJOBB_473105930865CspB3.92e-27cold shock protein83.0898.48CAD00094