Genome ID:GCA_012534935.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 11 | 10 | 4 | 15.39 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BMAEBEMH_1 | 2587998 | 2588852 | aadK | ARO:3002627 | aadK | 97.54 | 100.00 | AL009126.1 |
| BMAEBEMH_1 | 2569230 | 2570432 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
| BMAEBEMH_1 | 2396456 | 2397625 | bmr | ARO:3003007 | bmr | 99.49 | 100.00 | M33768.1 |
| BMAEBEMH_1 | 1372912 | 1373229 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| BMAEBEMH_1 | 1372574 | 1372912 | ykkC | ARO:3003063 | ykkC | 99.11 | 100.00 | AL009126.1 |
| BMAEBEMH_1 | 895074 | 897644 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
| BMAEBEMH_1 | 299364 | 300797 | lmrB | ARO:3002813 | lmrB | 98.95 | 100.00 | JYFL01000006.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BMAEBEMH_1 | 4074375 | 4075751 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 98.77 | 100.00 | D12567 |
| BMAEBEMH_1 | 2588000 | 2588852 | aadK | Streptomycin | 98.48 | 99.77 | M26879 |
| BMAEBEMH_1 | 273087 | 274006 | mph(K) | Spiramycin, Telithromycin | 97.61 | 99.89 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BMAEBEMH_1 | 4074378 | 4075751 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 98.69 | 100.00 | WP_063856081.1 |
| BMAEBEMH_1 | 594316 | 595956 | vmlR | ABC-F type ribosomal protection protein VmlR | INTERNAL_STOP | 97.62 | 100.00 | WP_003234144.1 |
| BMAEBEMH_1 | 2588001 | 2588852 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 97.54 | 100.00 | WP_003229862.1 |
| BMAEBEMH_1 | 4071882 | 4072400 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.17 | 100.00 | WP_003242546.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| BMAEBEMH_1 | 3148014 | 3148952 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.68 | 100.00 | NP_391077 |
| BMAEBEMH_1 | 3569646 | 3570827 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| BMAEBEMH_1 | 3568021 | 3569163 | capA | 0.0 | Capsule | Immune modulation | 99.56 | 100.00 | NP_391469 |
| BMAEBEMH_1 | 3569182 | 3569631 | capC | 0.0 | Capsule | Immune modulation | 99.56 | 100.00 | NP_391470 |
| BMAEBEMH_1 | 3151839 | 3152624 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391080 |
| BMAEBEMH_1 | 1913729 | 1915492 | dep/capD | 0.0 | Capsule | Immune modulation | 99.15 | 100.00 | NP_389723 |
| BMAEBEMH_1 | 3140857 | 3147994 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.77 | 100.00 | NP_391076 |
| BMAEBEMH_1 | 3150617 | 3151813 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.58 | 100.00 | NP_391079 |
| BMAEBEMH_1 | 2193264 | 2193905 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 97.82 | 100.00 | NP_390062 |
| BMAEBEMH_1 | 3148980 | 3150599 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.78 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BMAEBEMH_1 | 132546 | 133682 | tufA | 0.0 | elongation factor Tu | 85.75 | 95.69 | AHM69299 |
| BMAEBEMH_1 | 18677 | 19546 | pdxS | 5.34e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.45 | 98.31 | ACE61268 |
| BMAEBEMH_1 | 1699242 | 1700018 | CodY | 3.33e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| BMAEBEMH_1 | 3414664 | 3415233 | ClpP | 2.47e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |