Genome ID：GCA_012931705.2

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
15	10	4	18.47

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
JGNHNHCM_1	3538307	3539683	tet(L)	ARO:3000179	tet(L)	99.78	100.00	M11036.1
JGNHNHCM_1	2759793	2760647	aadK	ARO:3002627	aadK	100.00	100.00	AL009126.1
JGNHNHCM_1	2741084	2742286	blt	ARO:3003006	blt	100.00	100.00	L32599.1
JGNHNHCM_1	2576692	2577486	APH(3')-IIIa	ARO:3002647	APH(3')-IIIa	100.00	100.00	CP004067.1
JGNHNHCM_1	2518122	2519291	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
JGNHNHCM_1	1408555	1408872	ykkD	ARO:3003064	ykkD	100.00	100.00	AL009126.1
JGNHNHCM_1	1408217	1408555	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
JGNHNHCM_1	916787	919357	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	100.00	100.00	AL009126.3
JGNHNHCM_1	604745	606388	vmlR	ARO:3004476	vmlR	100.00	100.00	NC_000964.3
JGNHNHCM_1	339163	339756	tmrB	ARO:3003059	tmrB	100.00	100.00	AL009126.3
JGNHNHCM_1	288661	290094	lmrB	ARO:3002813	lmrB	100.00	100.00	JYFL01000006.1
JGNHNHCM_1	275846	276766	mphK	ARO:3004541	mphK	100.00	100.00	CP010314.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
JGNHNHCM_1	2759793	2760647	aadK	Streptomycin	100.00	100.00	M26879
JGNHNHCM_1	2576692	2577486	aph(3')-III	Kanamycin, Amikacin, Neomycin, Butirosin, Isepamicin, Lividomycin, Paromomycin, Ribostamycin	100.00	100.00	M26832
JGNHNHCM_1	275846	276766	mph(K)	Spiramycin, Telithromycin	100.00	100.00	NC_000964
JGNHNHCM_1	3538307	3539683	tet(L)	Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline	100.00	100.00	M29725

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
JGNHNHCM_1	2759796	2760647	aadK	aminoglycoside 6-adenylyltransferase AadK	EXACTX	100.00	100.00	WP_003229862.1
JGNHNHCM_1	2576695	2577486	aph(3')-IIIa	aminoglycoside O-phosphotransferase APH(3')-IIIa	EXACTX	100.00	100.00	WP_001096887.1
JGNHNHCM_1	275846	276763	mphK	macrolide 2'-phosphotransferase MphK	EXACTX	100.00	100.00	WP_003246254.1
JGNHNHCM_1	4196724	4197242	satA	streptothricin N-acetyltransferase SatA	EXACTX	100.00	100.00	WP_003242546.1
JGNHNHCM_1	3538310	3539683	tet(L)	tetracycline efflux MFS transporter Tet(L)	EXACTX	100.00	100.00	WP_001574277.1
JGNHNHCM_1	4199245	4200618	tet(L)	tetracycline efflux MFS transporter Tet(L)	EXACTX	100.00	100.00	WP_003242953.1
JGNHNHCM_1	604748	606388	vmlR	ABC-F type ribosomal protection protein VmlR	EXACTX	100.00	100.00	WP_003234144.1
JGNHNHCM_1	2083035	2085629	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.15	99.88	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
JGNHNHCM_1	3709381	3710523	capA	0.0	Capsule	Immune modulation	100.00	100.00	NP_391469
JGNHNHCM_1	3711006	3712187	capB	0.0	Capsule	Immune modulation	100.00	100.00	NP_391471
JGNHNHCM_1	3710542	3710991	capC	0.0	Capsule	Immune modulation	100.00	100.00	NP_391470
JGNHNHCM_1	2036377	2038140	dep/capD	0.0	Capsule	Immune modulation	100.00	100.00	NP_389723
JGNHNHCM_1	3315621	3316406	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391080
JGNHNHCM_1	3311785	3312723	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391077
JGNHNHCM_1	3314399	3315595	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391079
JGNHNHCM_1	3312751	3314370	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391078
JGNHNHCM_1	3304629	3311765	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391076
JGNHNHCM_1	2318770	2319411	hlyIII	0.0	Hemolysin III	Exotoxin	100.00	100.00	NP_390062

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
JGNHNHCM_1	132882	134018	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
JGNHNHCM_1	19074	19943	pdxS	3.14e-149	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
JGNHNHCM_1	1721819	1722595	CodY	3.43e-124	nutrient-responsive regulator	81.08	100.00	ACJ80679
JGNHNHCM_1	3557795	3558364	ClpP	2.54e-98	part of proteolytic complex	81.05	97.44	BAB94595