Genome ID:GCA_013267035.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1210817.55

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
MDCGABEN_2065810959548lmrBARO:3002813lmrB99.37100.42JYFL01000006.1
MDCGABEN_2064529646216mphKARO:3004541mphK99.02100.00CP010314.1
MDCGABEN_1734200444574Bacillus subtilis mprFARO:3003324Bsub_mprF99.53100.00AL009126.3
MDCGABEN_1353822938822tmrBARO:3003059tmrB98.48100.00AL009126.3
MDCGABEN_2253217932496ykkDARO:3003064ykkD99.05100.00AL009126.1
MDCGABEN_2253184132179ykkCARO:3003063ykkC100.00100.00AL009126.1
MDCGABEN_1741493316576vmlRARO:3004476vmlR98.35100.00NC_000964.3
MDCGABEN_1491487815732aadKARO:3002627aadK98.59100.00AL009126.1
MDCGABEN_1511248813657bmrARO:3003007bmr99.74100.00M33768.1
MDCGABEN_743551557bltARO:3003006blt99.00100.00L32599.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
MDCGABEN_2064529646216mph(K)Spiramycin, Telithromycin99.35100.00NC_000964
MDCGABEN_1491487815732aadKStreptomycin98.71100.00M26879

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
MDCGABEN_2064529646213mphKmacrolide 2'-phosphotransferase MphKBLASTX99.02100.00WP_003246254.1
MDCGABEN_1491487815729aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.59100.00WP_003229862.1
MDCGABEN_1741493316573vmlRABC-F type ribosomal protection protein VmlRBLASTX98.35100.00WP_003234144.1
MDCGABEN_18210711589satAstreptothricin N-acetyltransferase SatABLASTX94.22100.00WP_003242546.1
MDCGABEN_164103007rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.65100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
MDCGABEN_2106821863capB0.0CapsuleImmune modulation99.75100.00NP_391471
MDCGABEN_441491315698dhbA0.0BacillibactinNutritional/Metabolic factor99.75100.00NP_391080
MDCGABEN_22159516592hlyIII0.0Hemolysin IIIExotoxin99.69100.00NP_390062
MDCGABEN_441369114887dhbC0.0BacillibactinNutritional/Metabolic factor99.33100.00NP_391079
MDCGABEN_403905340816dep/capD0.0CapsuleImmune modulation99.32100.00NP_389723
MDCGABEN_21018782327capC0.0CapsuleImmune modulation99.11100.00NP_391470
MDCGABEN_21023463488capA0.0CapsuleImmune modulation98.78100.00NP_391469
MDCGABEN_44392111057dhbF0.0BacillibactinNutritional/Metabolic factor98.74100.00NP_391076
MDCGABEN_441107712015dhbB0.0BacillibactinNutritional/Metabolic factor98.40100.00NP_391077
MDCGABEN_441204313662dhbE0.0BacillibactinNutritional/Metabolic factor97.41100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
MDCGABEN_2272814827012tufA0.0elongation factor Tu84.9695.69AHM69299
MDCGABEN_2181124410375pdxS8.09e-152encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
MDCGABEN_5942166CodY5.75e-127nutrient-responsive regulator81.08100.00ACJ80679
MDCGABEN_1651310613675ClpP1.20e-100part of proteolytic complex81.0597.44BAB94595
MDCGABEN_19880118403spxA12.76e-71redox-responsive transcription factor83.97100.00AAF21893
MDCGABEN_19880118403spx1.65e-69essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
MDCGABEN_1159326174SpoVG5.51e-39RNA-binding protein81.4879.41AAT02994
MDCGABEN_18174807677CspA3.49e-33cold shock protein90.91100.00CAA62903
MDCGABEN_5216301824CspD2.56e-29cold shock protein80.0098.48CAC99957
MDCGABEN_5216301827CspB5.32e-29cold shock protein80.30100.00CAD00094