Genome ID:GCA_013285325.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 4 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MFFGAFPN_1 | 2608102 | 2608956 | aadK | ARO:3002627 | aadK | 98.24 | 100.00 | AL009126.1 |
| MFFGAFPN_1 | 2589305 | 2590507 | blt | ARO:3003006 | blt | 99.00 | 100.00 | L32599.1 |
| MFFGAFPN_1 | 2386895 | 2388064 | bmr | ARO:3003007 | bmr | 99.23 | 100.00 | M33768.1 |
| MFFGAFPN_1 | 1358248 | 1358565 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| MFFGAFPN_1 | 1357910 | 1358248 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| MFFGAFPN_1 | 895678 | 898248 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.88 | 100.00 | AL009126.3 |
| MFFGAFPN_1 | 593738 | 595381 | vmlR | ARO:3004476 | vmlR | 98.90 | 100.00 | NC_000964.3 |
| MFFGAFPN_1 | 340941 | 341534 | tmrB | ARO:3003059 | tmrB | 96.95 | 100.00 | AL009126.3 |
| MFFGAFPN_1 | 290388 | 291821 | lmrB | ARO:3002813 | lmrB | 100.00 | 100.00 | JYFL01000006.1 |
| MFFGAFPN_1 | 277572 | 278492 | mphK | ARO:3004541 | mphK | 99.02 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MFFGAFPN_1 | 277572 | 278492 | mph(K) | Spiramycin, Telithromycin | 99.13 | 100.00 | NC_000964 |
| MFFGAFPN_1 | 4075223 | 4076599 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.06 | 100.00 | D12567 |
| MFFGAFPN_1 | 2608104 | 2608956 | aadK | Streptomycin | 98.36 | 99.77 | M26879 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MFFGAFPN_1 | 277572 | 278489 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 99.02 | 100.00 | WP_003246254.1 |
| MFFGAFPN_1 | 4075226 | 4076599 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 98.91 | 100.00 | WP_063856081.1 |
| MFFGAFPN_1 | 593741 | 595381 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.90 | 100.00 | WP_003234144.1 |
| MFFGAFPN_1 | 2608105 | 2608956 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.24 | 100.00 | WP_003229862.1 |
| MFFGAFPN_1 | 4072760 | 4073278 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.75 | 100.00 | WP_003242546.1 |
| MFFGAFPN_1 | 2083148 | 2085745 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.94 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| MFFGAFPN_1 | 2187681 | 2188322 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.84 | 100.00 | NP_390062 |
| MFFGAFPN_1 | 3576693 | 3577874 | capB | 0.0 | Capsule | Immune modulation | 99.75 | 100.00 | NP_391471 |
| MFFGAFPN_1 | 3163976 | 3164761 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.62 | 100.00 | NP_391080 |
| MFFGAFPN_1 | 3575068 | 3576210 | capA | 0.0 | Capsule | Immune modulation | 99.47 | 100.00 | NP_391469 |
| MFFGAFPN_1 | 3576229 | 3576678 | capC | 0.0 | Capsule | Immune modulation | 99.33 | 100.00 | NP_391470 |
| MFFGAFPN_1 | 3160140 | 3161078 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.25 | 100.00 | NP_391077 |
| MFFGAFPN_1 | 3162754 | 3163950 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.25 | 100.00 | NP_391079 |
| MFFGAFPN_1 | 2033008 | 2034771 | dep/capD | 0.0 | Capsule | Immune modulation | 99.15 | 100.00 | NP_389723 |
| MFFGAFPN_1 | 3152984 | 3160120 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.77 | 100.00 | NP_391076 |
| MFFGAFPN_1 | 3161106 | 3162725 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.03 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MFFGAFPN_1 | 132557 | 133693 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| MFFGAFPN_1 | 18749 | 19618 | pdxS | 3.05e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| MFFGAFPN_1 | 1697237 | 1698013 | CodY | 3.33e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| MFFGAFPN_1 | 3415361 | 3415930 | ClpP | 2.47e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |