Genome ID：GCA_013307265.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
0	26	30	39.70

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
CHAIFKFL_1	43633	44472	cbpD	0.0	Autolysin	Exoenzyme	100.00	100.00	WP_011226733
CHAIFKFL_1	467644	468237	STR_RS05880	0.0	Capsule	Immune modulation	100.00	100.00	WP_011226149
CHAIFKFL_1	467644	468237	STER_RS06030	0.0	Capsule	Immune modulation	99.83	100.00	WP_011226149
CHAIFKFL_1	467644	468237	STU_RS15260	0.0	Capsule	Immune modulation	99.83	100.00	WP_011226149
CHAIFKFL_1	1361459	1362415	STU_RS16250	0.0	Capsule	Immune modulation	99.79	100.00	WP_011226328
CHAIFKFL_1	1356605	1358389	STU_RS16230	0.0	Capsule	Immune modulation	99.66	100.00	WP_011226325
CHAIFKFL_1	1362412	1363560	STU_RS16255	0.0	Capsule	Immune modulation	99.65	100.00	WP_041828290
CHAIFKFL_1	1360666	1361475	STU_RS16245	0.0	Capsule	Immune modulation	99.63	100.00	WP_002948020
CHAIFKFL_1	1358386	1359441	STU_RS16235	0.0	Capsule	Immune modulation	99.53	100.00	WP_002948022
CHAIFKFL_1	1359461	1360666	STU_RS16240	0.0	Capsule	Immune modulation	99.50	100.00	WP_011226326
CHAIFKFL_1	232077	233735	fbp54	0.0	FBPs	Adherence	99.46	100.00	WP_011227179
CHAIFKFL_1	468237	469106	rfbA	0.0	Capsule	Immune modulation	99.42	100.00	WP_011681286
CHAIFKFL_1	1367056	1367907	rfbD	0.0	Capsule	Immune modulation	99.41	100.00	WP_014621820
CHAIFKFL_1	1363669	1364679	STU_RS16260	0.0	Capsule	Immune modulation	99.11	100.00	WP_011226330
CHAIFKFL_1	356402	357133	STU_RS14645	0.0	Capsule	Immune modulation	98.91	100.00	WP_011226048
CHAIFKFL_1	503004	503765	srtA	0.0	Sortase A	Exoenzyme	98.82	100.00	-
CHAIFKFL_1	356402	357133	STER_RS05315	0.0	Capsule	Immune modulation	98.63	100.00	WP_011681176
CHAIFKFL_1	422820	423609	cshA	0.0	Cell surface hydrophobicity proteins	Adherence	98.48	99.87	-
CHAIFKFL_1	354951	355691	STER_RS05305	0.0	Capsule	Immune modulation	98.38	100.00	WP_011681174
CHAIFKFL_1	1364679	1365953	STU_RS16265	0.0	Capsule	Immune modulation	98.20	100.00	WP_011226331
CHAIFKFL_1	357134	358588	STU_RS14650	0.0	Capsule	Immune modulation	98.14	100.00	WP_011226049
CHAIFKFL_1	354951	355691	STU_RS14635	0.0	Capsule	Immune modulation	98.11	100.00	WP_011226046
CHAIFKFL_1	343817	345271	STR_RS05265	0.0	Capsule	Immune modulation	98.01	100.00	WP_041827043
CHAIFKFL_1	354956	355691	STR_RS05250	0.0	Capsule	Immune modulation	97.96	98.13	WP_011227246
CHAIFKFL_1	357134	358588	STER_RS05320	0.0	Capsule	Immune modulation	97.06	99.73	WP_011681177
CHAIFKFL_1	355701	356393	STR_RS05255	0.0	Capsule	Immune modulation	96.97	100.00	WP_011227247
CHAIFKFL_1	355701	356393	STU_RS14640	0.0	Capsule	Immune modulation	96.97	100.00	WP_011226047
CHAIFKFL_1	828541	833436	SAG_RS09105	0.0	Agglutinin receptor	Adherence	96.94	100.00	WP_000167699
CHAIFKFL_1	828541	833484	SSU98_0978	0.0	Agglutinin receptor	Adherence	95.77	99.82	YP_001200536
CHAIFKFL_1	828541	833484	SSU05_0965	0.0	Agglutinin receptor	Adherence	95.75	99.82	YP_001198331
CHAIFKFL_1	355701	356393	STER_RS05310	0.0	Capsule	Immune modulation	91.63	100.00	WP_011681175
CHAIFKFL_1	866890	868193	eno	0.0	Streptococcal enolase	Exoenzyme	88.17	99.54	WP_000022832
CHAIFKFL_1	1651990	1653000	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	86.82	99.51	WP_002986042
CHAIFKFL_1	1306213	1307496	tig/ropA	0.0	Trigger factor	Stress survival	80.50	99.77	WP_000107753
CHAIFKFL_1	466169	467215	rfbB	0.0	Capsule	Immune modulation	80.42	100.00	WP_009659423
CHAIFKFL_1	340850	341433	SPD_RS01775	1.10e-146	Capsule	Immune modulation	83.08	96.20	WP_001819836
CHAIFKFL_1	343352	343816	STR_RS05260	0.0	Capsule	Immune modulation	98.71	63.52	WP_011227248

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
CHAIFKFL_1	833457	828544	B9H01_RS04765	0.0	glucan-binding protein	96.34	99.70	AUS90958
CHAIFKFL_1	506452	507435	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	94.82	100.00	AAK75326
CHAIFKFL_1	700550	699477	MntE	0.0	manganese homeostasis	94.41	99.72	ABF32167
CHAIFKFL_1	1535224	1537527	pfl2(Sp_0459)	0.0	formate acetyltransferase	92.97	99.22	AAK74619
CHAIFKFL_1	951829	950861	spr0084	0.0	pathogenitcity related	92.88	98.48	AAK98888
CHAIFKFL_1	680029	677783	metE	0.0	methionine biosynthesis enzymes	91.99	100.00	AAK74738
CHAIFKFL_1	600134	601615	SPD_0310	0.0	UPF0371 protein SPD_0310	91.90	100.00	ABJ54480
CHAIFKFL_1	63271	64269	recA	0.0	DNA recombination and repair	91.29	85.82	AAL00560
CHAIFKFL_1	27150	28121	prsA2	0.0	ribose-phosphate pyrophosphokinase	90.12	100.00	ABF36968
CHAIFKFL_1	1418644	1417493	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.32	99.74	AAL00050
CHAIFKFL_1	1382877	1380889	uvrB	0.0	excinuclease ABC, B subunit	88.99	100.00	AE014259_2
CHAIFKFL_1	490256	488526	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	87.69	100.00	AAK34199
CHAIFKFL_1	1849910	1848432	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.63	100.00	ADE32434
CHAIFKFL_1	868193	866892	Eno	0.0	enolase	86.21	99.77	ABP90468
CHAIFKFL_1	1834714	1832822	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	86.05	98.90	ABP91129
CHAIFKFL_1	674857	676566	PGM	0.0	phosphoglucomutase	83.89	99.65	ACH87041
CHAIFKFL_1	1693955	1694965	pdh	0.0	pyruvate dehydrogenase	83.09	99.70	ABP91006
CHAIFKFL_1	257737	256385	mnmE	0.0	central tRNA-modifying GTPase	82.12	98.91	ABP90420
CHAIFKFL_1	1744218	1742326	PepO	0.0	endopeptidase	80.03	100.00	ABF32980
CHAIFKFL_1	882626	881736	bglB	1.34e-178	putative phospho--glucosidase	88.89	99.66	AAK33487
CHAIFKFL_1	174540	173605	SP_0676	7.42e-168	transcription facot	81.73	96.89	AAK74821
CHAIFKFL_1	677591	676734	metF	1.51e-164	methionine biosynthesis enzymes	86.01	99.31	AAK74739
CHAIFKFL_1	395126	394422	covR	1.07e-130	responder protein	85.11	100.00	AAK71319
CHAIFKFL_1	572081	571410	rr01	4.19e-125	response regulator	84.38	99.56	CAB54566
CHAIFKFL_1	395126	394422	walR	5.37e-121	DNA-binding response regulator	81.28	100.00	ANC99504
CHAIFKFL_1	670903	670235	CiaR	6.42e-120	two-component response regulator	85.65	99.55	AAK74935
CHAIFKFL_1	670903	670232	ciaR	6.26e-118	two component system response regulator	83.48	99.12	AIK75708
CHAIFKFL_1	1158599	1157913	CovR	1.01e-117	serves to repress GAS virulence factor-encoding genes	80.79	100.00	ACE75886
CHAIFKFL_1	64545	64940	SpxA2	3.72e-74	transcriptional regulator	90.91	100.00	ERL21461
CHAIFKFL_1	268902	269303	SpxA1	3.78e-66	transcriptional regulator	80.60	100.00	ERL19273
CHAIFKFL_1	1306055	1305555	RopE (M5005_Spy_1611)	4.94e-75	probable DNA-directed RNA polymerase subunit delta	81.44	87.43	AAK34603
CHAIFKFL_1	1535224	1537521	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	82.94	98.08	MYN69560
CHAIFKFL_1	1729817	1728798	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	96.47	100.00	ABJ55451