Genome ID:GCA_013332455.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310717.83

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
GCJBNFKD_12600385601239aadKARO:3002627aadK98.24100.00AL009126.1
GCJBNFKD_12574389575591bltARO:3003006blt100.00100.00L32599.1
GCJBNFKD_16502618502956ykkCARO:3003063ykkC100.00100.00AL009126.1
GCJBNFKD_16502301502618ykkDARO:3003064ykkD99.05100.00AL009126.1
GCJBNFKD_17435190436833vmlRARO:3004476vmlR98.72100.00NC_000964.3
GCJBNFKD_12377750378919bmrARO:3003007bmr99.49100.00M33768.1
GCJBNFKD_17160114160707tmrBARO:3003059tmrB97.46100.00AL009126.3
GCJBNFKD_17109555110988lmrBARO:3002813lmrB99.16100.00JYFL01000006.1
GCJBNFKD_179674097660mphKARO:3004541mphK98.37100.00CP010314.1
GCJBNFKD_182724929819Bacillus subtilis mprFARO:3003324Bsub_mprF99.77100.00AL009126.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
GCJBNFKD_110215471022923tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline99.42100.00D12567
GCJBNFKD_12600387601239aadKStreptomycin98.7199.77M26879
GCJBNFKD_179674097660mph(K)Spiramycin, Telithromycin97.94100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
GCJBNFKD_110215501022923tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX99.56100.00WP_063856081.1
GCJBNFKD_17435193436833vmlRABC-F type ribosomal protection protein VmlRBLASTX98.72100.00WP_003234144.1
GCJBNFKD_179674097657mphKmacrolide 2'-phosphotransferase MphKBLASTX98.37100.00WP_003246254.1
GCJBNFKD_12600388601239aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.24100.00WP_003229862.1
GCJBNFKD_110190301019548satAstreptothricin N-acetyltransferase SatABLASTX91.91100.00WP_003242546.1
GCJBNFKD_126991172508rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.60100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
GCJBNFKD_1529556530698capA0.0CapsuleImmune modulation99.83100.00NP_391469
GCJBNFKD_12171285171926hlyIII0.0Hemolysin IIIExotoxin99.69100.00NP_390062
GCJBNFKD_1531181532362capB0.0CapsuleImmune modulation99.66100.00NP_391471
GCJBNFKD_1109056109994dhbB0.0BacillibactinNutritional/Metabolic factor99.57100.00NP_391077
GCJBNFKD_1530717531166capC0.0CapsuleImmune modulation99.56100.00NP_391470
GCJBNFKD_1111670112866dhbC0.0BacillibactinNutritional/Metabolic factor99.33100.00NP_391079
GCJBNFKD_1101906109036dhbF0.0BacillibactinNutritional/Metabolic factor99.2299.99NP_391076
GCJBNFKD_122456326326dep/capD0.0CapsuleImmune modulation99.21100.00NP_389723
GCJBNFKD_1112892113677dhbA0.0BacillibactinNutritional/Metabolic factor98.98100.00NP_391080
GCJBNFKD_1110022111641dhbE0.0BacillibactinNutritional/Metabolic factor98.33100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
GCJBNFKD_202792026784tufA0.0elongation factor Tu84.9695.69AHM69299
GCJBNFKD_242295098pdxS1.10e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
GCJBNFKD_16192433191657CodY7.54e-125nutrient-responsive regulator81.08100.00ACJ80679
GCJBNFKD_1374678375247ClpP6.37e-99part of proteolytic complex81.0597.44BAB94595
GCJBNFKD_16653307652915spxA15.93e-70redox-responsive transcription factor83.97100.00AAF21893
GCJBNFKD_16653307652915spx3.53e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
GCJBNFKD_213463634394SpoVG7.48e-39RNA-binding protein81.4879.41AAT02994
GCJBNFKD_17379947380144CspA2.01e-31cold shock protein90.91100.00CAA62903