Genome ID：GCA_013388335.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
13	10	4	16.88

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
HCEGDJED_1	2735688	2736542	aadK	ARO:3002627	aadK	100.00	100.00	AL009126.1
HCEGDJED_1	2716979	2718181	blt	ARO:3003006	blt	100.00	100.00	L32599.1
HCEGDJED_1	2494661	2495830	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
HCEGDJED_1	1376858	1377175	ykkD	ARO:3003064	ykkD	100.00	100.00	AL009126.1
HCEGDJED_1	1376520	1376858	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
HCEGDJED_1	916778	919348	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	100.00	100.00	AL009126.3
HCEGDJED_1	604735	606378	vmlR	ARO:3004476	vmlR	100.00	100.00	NC_000964.3
HCEGDJED_1	339154	339747	tmrB	ARO:3003059	tmrB	100.00	100.00	AL009126.3
HCEGDJED_1	288651	290084	lmrB	ARO:3002813	lmrB	100.00	100.00	JYFL01000006.1
HCEGDJED_1	275836	276756	mphK	ARO:3004541	mphK	100.00	100.00	CP010314.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
HCEGDJED_1	2735688	2736542	aadK	Streptomycin	100.00	100.00	M26879
HCEGDJED_1	275836	276756	mph(K)	Spiramycin, Telithromycin	100.00	100.00	NC_000964
HCEGDJED_1	4187688	4189064	tet(L)	Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline	100.00	100.00	X08034

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
HCEGDJED_1	2735691	2736542	aadK	aminoglycoside 6-adenylyltransferase AadK	EXACTX	100.00	100.00	WP_003229862.1
HCEGDJED_1	275836	276753	mphK	macrolide 2'-phosphotransferase MphK	EXACTX	100.00	100.00	WP_003246254.1
HCEGDJED_1	4185170	4185688	satA	streptothricin N-acetyltransferase SatA	EXACTX	100.00	100.00	WP_003242546.1
HCEGDJED_1	4187691	4189064	tet(L)	tetracycline efflux MFS transporter Tet(L)	EXACTX	100.00	100.00	WP_003242953.1
HCEGDJED_1	604738	606378	vmlR	ABC-F type ribosomal protection protein VmlR	EXACTX	100.00	100.00	WP_003234144.1
HCEGDJED_1	2051338	2053932	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.15	99.88	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
HCEGDJED_1	3697827	3698969	capA	0.0	Capsule	Immune modulation	100.00	100.00	NP_391469
HCEGDJED_1	3699452	3700633	capB	0.0	Capsule	Immune modulation	100.00	100.00	NP_391471
HCEGDJED_1	3698988	3699437	capC	0.0	Capsule	Immune modulation	100.00	100.00	NP_391470
HCEGDJED_1	2004680	2006443	dep/capD	0.0	Capsule	Immune modulation	100.00	100.00	NP_389723
HCEGDJED_1	3291517	3292302	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391080
HCEGDJED_1	3287681	3288619	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391077
HCEGDJED_1	3290295	3291491	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391079
HCEGDJED_1	3288647	3290266	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391078
HCEGDJED_1	3280525	3287661	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391076
HCEGDJED_1	2295306	2295947	hlyIII	0.0	Hemolysin III	Exotoxin	100.00	100.00	NP_390062

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
HCEGDJED_1	132882	134018	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
HCEGDJED_1	19074	19943	pdxS	3.13e-149	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
HCEGDJED_1	1690122	1690898	CodY	3.42e-124	nutrient-responsive regulator	81.08	100.00	ACJ80679
HCEGDJED_1	3546240	3546809	ClpP	2.54e-98	part of proteolytic complex	81.05	97.44	BAB94595